Gene Information

Name : Dd586_0990 (Dd586_0990)
Accession : YP_003332580.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1098580 - 1099269 bp
Length : 690 bp
Strand : +
Note : KEGG: dze:Dd1591_3106 two component transcriptional regulator PhoB, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regul

DNA sequence : 
ATGGCAAGACGTATTTTGGTGGTGGAAGATGAAGCGCCGATTCGTGAGATGGTGTGCTTCGTGCTTGAGCAGAACGGCTA
TCAGCCGGTTGAGGCCGAGGATTACGACAGCGCGGTGAACCGGCTGGCTGAGCCTTATCCTGAGCTGGTGCTGCTGGACT
GGATGCTGCCCGGTGGGTCCGGTTTACAGTTTATCAAGCACATGAAACGTGAAGCGCTGACGCGGGATATTCCGGTCATG
ATGCTGACGGCCCGTGGTGAAGAAGAAGATCGTGTGCGCGGTCTTGAAGTCGGTGCCGATGATTACATCACCAAACCGTT
TTCACCGAAAGAGTTGGTGGCGCGCATCAAAGCGGTAATGCGTCGGATTTCGCCGATGGCGGTGGAAGAAGTGATCGAAA
TGCGCGGCTTAAGCCTGGATCCTTCCTCTCACCGGGTGACCACGGAAGAGCACGCGCTGGACATGGGGCCGACGGAGTTC
AAACTGCTGCACTTCTTTATGACTCACCCTGAACGGGTATATAGTCGAGAGCAGTTGCTGAATCACGTGTGGGGCACTAA
CGTTTATGTTGAGGATCGTACTGTGGATGTCCATATCCGCCGTCTGCGCAAGGCGTTGGAGACCAGTGGACACGACAAGA
TGGTTCAGACCGTTCGGGGAACTGGATACCGTTTCTCAACACGTTATTGA

Protein sequence : 
MARRILVVEDEAPIREMVCFVLEQNGYQPVEAEDYDSAVNRLAEPYPELVLLDWMLPGGSGLQFIKHMKREALTRDIPVM
MLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMRGLSLDPSSHRVTTEEHALDMGPTEF
KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALETSGHDKMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-34 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_0990 YP_003332580.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 4e-39 43
Dd586_0990 YP_003332580.1 winged helix family two component transcriptional regulator CP001138.1.gene2239. Protein 3e-34 41
Dd586_0990 YP_003332580.1 winged helix family two component transcriptional regulator CP000647.1.gene2531. Protein 2e-35 41
Dd586_0990 YP_003332580.1 winged helix family two component transcriptional regulator BAC0596 Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_0990 YP_003332580.1 winged helix family two component transcriptional regulator VFG1563 Protein 1e-34 41
Dd586_0990 YP_003332580.1 winged helix family two component transcriptional regulator VFG1702 Protein 1e-34 41