Gene Information

Name : xerD3 (DhcVS_623)
Accession : YP_003330097.1
Strain : Dehalococcoides sp. VS
Genome accession: NC_013552
Putative virulence/resistance : Unknown
Product : site-specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 585789 - 586712 bp
Length : 924 bp
Strand : -
Note : -

DNA sequence :
ATGCAGGAGAATTTTAACAAATACCTTGAATATCTGTCGGTAGAAAAAAATGTTTCGGCGTATACCCTTAGAAACTACCG
CACAGATTTGATTGGTTTTGTTAACTACCTGATTGAAAAAAAAGTGAGCTCTTTTGACAGGGTAGACCGCTATATCCTGC
GGGACTATATGTCCAGCCTGATAGCCAAAGGAATTGTTAAAGGCAGTATTGCCCGTAAACTTTCGGCTGTACGTTCTTTT
TACCGTTACCTTATGCGGGAAGGCCTTATCCAGAAAAACCCCACCCTAAATGCCTCCAGCCCCCGTCTGGATAAACGCCT
GCCGGAGTTTCTGACTACCGCTGAAGTTAGTAAACTGCTGCGGATGCCGGATTCATCCACCCCCCAGGGTTTGCGGGACA
AAGCATTTATGGAGCTGCTTTATGCCAGCGGCCTGCGGGTGAGTGAGCTGGTCAAACTGGATATAGAAAACCTGGATTTG
CACTCCCACCAGATACGGGTCTGGGGCAAAGGGTCTAAAGAACGCATAGTTCTGATGGGTCTGCCGGCAATCCAGTCTAT
CCAAACCTATCTAAACCTGGGCAGACCCTTGCTGAAAGGCAAGCGGAATACTCCAGCTTTATTCCTTAATCCAAATGGCG
GCAGACTGAGTGCCCGCAGTTTTCAGGAAAGGCTGGATAAACTGGCACACCAAGCCGGTATTGAAAAACACGTACACCCC
CACATGCTGCGCCATACCTTTGCCACTCACCTGCTGGACGGCGGGGCAGACTTAAGGGTAGTACAGGAGCTACTCGGCCA
CTCAAACCTTTCTACTACCCAGATATATACCCACGTTACCAAAAGCCAAGCCCGCAAAGTCTATATGTCCAGCCACCCGC
TGGCCAAACCTCAGAATGATACTTCAGGGAGTGAAGAGGAATGA

Protein sequence :
MQENFNKYLEYLSVEKNVSAYTLRNYRTDLIGFVNYLIEKKVSSFDRVDRYILRDYMSSLIAKGIVKGSIARKLSAVRSF
YRYLMREGLIQKNPTLNASSPRLDKRLPEFLTTAEVSKLLRMPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENLDL
HSHQIRVWGKGSKERIVLMGLPAIQSIQTYLNLGRPLLKGKRNTPALFLNPNGGRLSARSFQERLDKLAHQAGIEKHVHP
HMLRHTFATHLLDGGADLRVVQELLGHSNLSTTQIYTHVTKSQARKVYMSSHPLAKPQNDTSGSEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-42 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-42 42