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Name : tktA (DhcVS_584) Accession : YP_003330061.1 Strain : Dehalococcoides sp. VS Genome accession: NC_013552 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 549490 - 551490 bp Length : 2001 bp Strand : - Note : - DNA sequence : ATGTCAAATACGAAGTTAGATAGTTTATGTATAAATGCCCTTCGCTTTCTTTCGGTAGATGCTGTTCAGAAGGCAAATTC GGGGCATCCCGGAGCACCTATGGGTATGGCCGCTATGGCATATGCCCTGTGGCAAAAATTTCTTAAGCATAACCCGCAGG ATCCCGTCTGGCCTAACCGTGACCGTTTTATACTCTCAGCTGGCCATGCCTCAGCTTTGCTTTACTCACTTCTCCACCTT ACCGGTTATGACTTGCCGCTGGATGAGCTGAAAAATTTCCGCCAGTGGGGCAGTAAAACCCCGGGGCACCCGGAATACGG CCTGACCCCCGGCGTTGAGATGACTACCGGCCCGCTTGGGCAGGGTTTTGCCAGCGGTGTGGGTATGGCTATGGCCGAAG CCCATCTGGCCGCCGTTTTTAACCAGCCGGATTGCAAAATAATAGACCATTATACTTACGGTATAGTCTCTGACGGAGAC CTGATGGAGGGTGTGGCCTCCGAAGCAGCCTCTCTGGCCGGGCATCTGGCACTGGGTAAGCTGATTTACCTGTATGACGA TAATGAAATATCTATTGAAGGTTCAACAGAGCTGGCTTTTACCGAAAATACAGCTCTGCGTTTTGAAAGTTACGGCTGGC AGGTAATTGGCCCGGTAGACGGACTTGATCCTGAGGCAGTTTCAGTGGCTATTAAAGAAGCCCAGTCAGATTCCGCCCGC CCCAGTCTGATTATCTGTAAAACAGTTATCGGTTTTGGCAGCCCGAACAAGGCTGGCAAGGCCTCTGCTCATGGCGAACC GCTGGGAACAGACGAAGTGGCCAAAAGCCGCAAATCTTTAGGGTGGGATTACGAGCCTTTTGTAATACCGCCTGAAGCTC TGGCGGAATTCCGCATGGCACTGGATAAAGGCAAAACTGCCCAACAGGTCTGGCAATCCAAGCTGGACTACTATTCAAGC CGTTATCCCGAAAAAGCCGCCCTTTTACAGGACAGGCTTTCTGGTAAGCTACCCGAAGACTGGGATAAAGACCTGGATAA ACTTTTTGACAAGGCTATGGCCAGCCGCGAGGCTTCCGGTTTGATTATAAATACACTGGCTTCCCGCCTGCCAGCCCTTA TGGGCGGTTCGGCAGACCTCAGCCCGTCTAACAAAACTGTTATCAAAGACGGCGGCGAATATGAACCGCCGCATTATGAG GGGCGGAATATCCATTTCGGAGTGCGGGAACACGCCATGGGGGCAATAGCCAACGGGCTGGCTCTCCACGGCGGGATTAC ACCTTATGTTGCCACTTTCCTTATATTTTATGATTACATGCGTCCGGCGGTACGGCTGGCATCACTTATGGGGCAAAGGA TTATTTATATCTTCACCCATGACTCTATCGGTCTGGGAGAGGACGGCCCTACCCACCAACCTATTGAACAGCTGGCCGGT TTACGTTCGGTGCCCGGTCTGGTTACTATCCGCCCGGCAGATTCGTATGAAACAGCTCAGGCATGGAAAATGGCTATACT CCGCAAGAATGGCCCGACCGCTATTGCCCTGTCTCGCCAGAAACTGCCGCTTTTAGATAACTCGCAGGCAAATTCCGTAA ACTTGTCTAAAGGGGCATATATACTGGCAGAGACCGATTCCCGCCCGCAGGTTGCCCTGGTAGCCAGCGGCTCAGAAGTA AGCATAGCCGTTCAGGCAGCTGAAATACTTAAAAACAAAGGTATCTCGTCAAGAGTAGTATCCTTCCCTTCGTGGCAGCT TTTTGAGGCTCAACCCCAGACCTACCGCCAGAGCATATTGCCAGCTTCCCTGCCACGGGTAATAATAGAAGCCGGCAGCG CGCAGGGATGGTGCAAATATTTGGGCGCAAACGGCGCTCTTATTTCCATTGACCATTTCGGAGCATCAGCCCCGGTGCCT GTGCTTTACCAACACTTTGGGCTAACCCCGGAAAATATGGCTGAAAAGGCTTTAAAGCTTTTGGAGAATGAAGATGAGTA A Protein sequence : MSNTKLDSLCINALRFLSVDAVQKANSGHPGAPMGMAAMAYALWQKFLKHNPQDPVWPNRDRFILSAGHASALLYSLLHL TGYDLPLDELKNFRQWGSKTPGHPEYGLTPGVEMTTGPLGQGFASGVGMAMAEAHLAAVFNQPDCKIIDHYTYGIVSDGD LMEGVASEAASLAGHLALGKLIYLYDDNEISIEGSTELAFTENTALRFESYGWQVIGPVDGLDPEAVSVAIKEAQSDSAR PSLIICKTVIGFGSPNKAGKASAHGEPLGTDEVAKSRKSLGWDYEPFVIPPEALAEFRMALDKGKTAQQVWQSKLDYYSS RYPEKAALLQDRLSGKLPEDWDKDLDKLFDKAMASREASGLIINTLASRLPALMGGSADLSPSNKTVIKDGGEYEPPHYE GRNIHFGVREHAMGAIANGLALHGGITPYVATFLIFYDYMRPAVRLASLMGQRIIYIFTHDSIGLGEDGPTHQPIEQLAG LRSVPGLVTIRPADSYETAQAWKMAILRKNGPTAIALSRQKLPLLDNSQANSVNLSKGAYILAETDSRPQVALVASGSEV SIAVQAAEILKNKGISSRVVSFPSWQLFEAQPQTYRQSILPASLPRVIIEAGSAQGWCKYLGANGALISIDHFGASAPVP VLYQHFGLTPENMAEKALKLLENEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 5e-140 | 53 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 6e-135 | 51 |
