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Name : lysU (DhcVS_517) Accession : YP_003329998.1 Strain : Dehalococcoides sp. VS Genome accession: NC_013552 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase (class II) Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 485097 - 486593 bp Length : 1497 bp Strand : - Note : - DNA sequence : ATGCCGGAAGAATATCTGAACGCTCAAAAAACGGAAAAACTAGAACGGATAAAGAGCCGGGGTATAAACCCCTATCCAGC CACTTTCCATCCCAGCCATACCAGCGCACAAGCCGTAGCTTTGCTAGCGGAGCTTGAAACACAGGAAAACCCGCCTAAAG AAACCCTGAGGATTGCAGGGAGAATTATGACCCGGCGCGACATGGGCAAGATTTCCTTTATGGATATACGTGACGGCAGC GGCAAAATACAGATTTTCTGTCGTCAGAATGATATGGACGAAGCGAGTATAGAACTCCTTAAAGACCTGGATTTGGGTGA TTTTATAGGCGCAGAGGGCAGCCTGATGCGTACCCGTACCGGTGAGCCCAGTCTGGCGGCTACCAGAATAACCATGCTCT CAAAATCCCTACTGCCTTTGCCGGAGAAATGGCATGGCCTGCAGGATGTGGAAAAACGTTACCGCCAGCGTTATCTTGAC CTTATTTCCAATGCGGATGCCCGTCAGACATTCCTTACCCGCAGCCGTGTTATAAGCGCCATACGCTGTTTTATGAGTGC CAAAGAATTTCTTGAAGTGGAAACACCGGTTCTCCAACCTGAAGCAGGCGGCGCACTCGCCCGCCCCTTTATTACCCATC ATCAGGCACTGGACTGTGATTTTTACATGCGCATAGCTTTGGAATTGCACCTTAAAAGGTTGATTGTTGGCGGTTTTGAC CGGGTATATGAGATAGGGCGGATATTCCGCAATGAGGGTGTCTCCACCCGCCATAACCCCGAATTTACCATGATGGAAAG CTACCAGGCTTATGCTGACTATAAAGACGTTATGGATTTCCTTGAGGAAATGGTCTCAAGTGTGGTCAAAGAAATAAGCG GCGGATATACTGTGCCGTTCGGGGATATTACACTGGATTTTACTCCCCCGTGGCCCCGTCTGACCATACGTGATGCCGTA AAGCAATATGCCGGTATAGATTTTTTTGATTTCCCCACCAAAGAAGCCTTGGCCGCGGAAATGACCCGCCGCAAACTGAA GGTAGACCCCGCCAAAGACTGGGGCAAACTGGTGGATGAGCTGGTAGGTGAATTTGTAGAACCCCACCTTATTCAACCCA CTTTCCTTACTGACCACCCGGTGGCCATGTCTCCGCTTGCCAAACAGAAGCCGGAAGACCCCCGCCTGACAGAGCGGTTT GAAGCCATTTGTGCCAATATGGAAATAGCCAATGCCTTTTCCGAACTGAATGACCCGGTAGAGCAAAGAGCACGTTTTAA GGAACAGCTTGAAAAACGCAACCAGTTGCGCACTGAAGAGTTCGAAAGTATAGATGAAGACTTTCTGGCCGCACTGGCAT ACGGCATGCCGCCAACCGGCGGTCTGGGCGTGGGTATTGACCGTTTGGTTATGCTGCTGACCAACCATGACTCTATCCGC GAAGTTATTTTATTTCCTGCCCTGAAAGATAGGGAAGACACAAAAACACAGGAATAA Protein sequence : MPEEYLNAQKTEKLERIKSRGINPYPATFHPSHTSAQAVALLAELETQENPPKETLRIAGRIMTRRDMGKISFMDIRDGS GKIQIFCRQNDMDEASIELLKDLDLGDFIGAEGSLMRTRTGEPSLAATRITMLSKSLLPLPEKWHGLQDVEKRYRQRYLD LISNADARQTFLTRSRVISAIRCFMSAKEFLEVETPVLQPEAGGALARPFITHHQALDCDFYMRIALELHLKRLIVGGFD RVYEIGRIFRNEGVSTRHNPEFTMMESYQAYADYKDVMDFLEEMVSSVVKEISGGYTVPFGDITLDFTPPWPRLTIRDAV KQYAGIDFFDFPTKEALAAEMTRRKLKVDPAKDWGKLVDELVGEFVEPHLIQPTFLTDHPVAMSPLAKQKPEDPRLTERF EAICANMEIANAFSELNDPVEQRARFKEQLEKRNQLRTEEFESIDEDFLAALAYGMPPTGGLGVGIDRLVMLLTNHDSIR EVILFPALKDREDTKTQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-110 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysU | YP_003329998.1 | lysyl-tRNA synthetase (class II) | VFG1668 | Protein | 2e-110 | 48 |
