Gene Information

Name : rplS (DhcVS_279)
Accession : YP_003329768.1
Strain : Dehalococcoides sp. VS
Genome accession: NC_013552
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 273855 - 274265 bp
Length : 411 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGAGACTATGAATAATCAGGAAACCCCTGAAACCAATGAAGAAGAAACCGCAGCTGAAGAAACAGTTGCTGTAGA
AAATACCGCAGAGGGAAAAGTTCTGCCGAGTTTCGGCCCCGGTGATACCATAAAAGTACACGCCCGCATTAAAGAAGGCG
ACAAAGAACGTATTCAGATGTTTCAGGGTGTAGTCCTTAAAATAAAACAGGCCGCTGACGGCGGCAATTTCACCGTTCGA
CGCATAAGCTACGGCGTAGGTGTTGAACGCACCTTCCCCTTCCTCTCACCCAACGTTACCAAGGTTGAGATTATGAAGAA
GGGTAAAGTACGCCGTGCCCGCCTGTTCTACCTGCGCAAGCTTTCCGGGAAAGCTGCCCGCATCAAAGAAGTTAAACAAA
CACCCTCTTAA

Protein sequence :
MEETMNNQETPETNEEETAAEETVAVENTAEGKVLPSFGPGDTIKVHARIKEGDKERIQMFQGVVLKIKQAADGGNFTVR
RISYGVGVERTFPFLSPNVTKVEIMKKGKVRRARLFYLRKLSGKAARIKEVKQTPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 3e-27 59
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 2e-19 49