Gene Information

Name : DhcVS_143 (DhcVS_143)
Accession : YP_003329644.1
Strain : Dehalococcoides sp. VS
Genome accession: NC_013552
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator, two-component system, OmpR family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 144508 - 145278 bp
Length : 771 bp
Strand : +
Note : -

DNA sequence : 
ATGGTAAAAGGTTGCAATACCCCCGGGTATTTACCCTCCTGTCTTGCCGAAAATACCCTCCGGCTTTATACTTTAGCCAT
GCCTGAGCATAAAATACTGGTAGTTGAAGATGACGCCACTCTGAGGGAGCTTTTGTGTTATAACCTTGCCAAGGAGGGGT
ATACGTTGGAATGTGCCGAAGACGGGCTGAAGGCGCTGGGTACTTACCGCCTGTTTAAGCCGTCATTGGTTATACTGGAT
GTGATGCTGCCGGGTATAGACGGCTTTGAACTTTGCCGTCTTATCCGTACGGAGAGCAGTGTTCCCATACTTATGCTGAC
CGCTCGTTCAAGCGAGTCTGATAAGGTAAACGGGCTGGAAGCTGGGGCGGATGATTATCTGTCCAAACCCTTTGGCATGA
GGGAATTGCTGGCCAGAATGAAGGCTCTTCTTCGCCGCAGCCAGACGCAAAACTCCCAAACAGAGACAACAGGCGGGCTG
AAAATAGGTGATTTGGAGATATTTATTGAACGCCATCTGGTCATGCGGAACGGGGTGGCTCTGGATTTTTCGCCTAAAGA
ATTTGATCTGTTTAGTTTTATGGTGCAGAACCGCTGCCGGGTTTTCAGCCGTGAACAGCTGCTGGAAAAGGTCTGGGGTT
ACGATTATCCCGGATGGACCCGCACTGTAGATGTGCATATAAGCTGGCTTCGTCAGAAGATAGAGGCCGACCCCTCCAGT
CCCCGTCATCTTATAACGGTGCGGGGAACTGGTTACAAGTTTGAGGAGTGA

Protein sequence : 
MVKGCNTPGYLPSCLAENTLRLYTLAMPEHKILVVEDDATLRELLCYNLAKEGYTLECAEDGLKALGTYRLFKPSLVILD
VMLPGIDGFELCRLIRTESSVPILMLTARSSESDKVNGLEAGADDYLSKPFGMRELLARMKALLRRSQTQNSQTETTGGL
KIGDLEIFIERHLVMRNGVALDFSPKEFDLFSFMVQNRCRVFSREQLLEKVWGYDYPGWTRTVDVHISWLRQKIEADPSS
PRHLITVRGTGYKFEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-35 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_012469.1.7685629. Protein 2e-48 48
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family HE999704.1.gene2815. Protein 7e-48 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_002952.2859905.p0 Protein 1e-47 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_003923.1003749.p0 Protein 1e-47 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_009782.5559369.p0 Protein 1e-47 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_002951.3237708.p0 Protein 1e-47 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_007622.3794472.p0 Protein 1e-47 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_002758.1121668.p0 Protein 1e-47 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_009641.5332272.p0 Protein 1e-47 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_013450.8614421.p0 Protein 1e-47 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_007793.3914279.p0 Protein 1e-47 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_002745.1124361.p0 Protein 1e-47 47
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family AE000516.2.gene3505. Protein 9e-46 46
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family AE016830.1.gene1681. Protein 1e-47 45
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_012469.1.7686381. Protein 5e-44 43
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_002952.2859858.p0 Protein 4e-34 42
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_007622.3794948.p0 Protein 4e-34 42
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_003923.1003417.p0 Protein 4e-34 42
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_013450.8614146.p0 Protein 4e-34 42
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_002951.3238224.p0 Protein 4e-34 42
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_007793.3914065.p0 Protein 4e-34 42
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_002758.1121390.p0 Protein 4e-34 42
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family NC_010079.5776364.p0 Protein 4e-34 42
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family AE015929.1.gene1106. Protein 9e-31 42
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family CP001138.1.gene2239. Protein 3e-30 41
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family CP000647.1.gene2531. Protein 5e-30 41
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family BAC0596 Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family VFG1390 Protein 1e-41 44
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family VFG1389 Protein 1e-34 44
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family VFG1563 Protein 1e-35 43
DhcVS_143 YP_003329644.1 DNA-binding response regulator, two-component system, OmpR family VFG1702 Protein 9e-36 43