Gene Information

Name : DhcVS_1333 (DhcVS_1333)
Accession : YP_003330760.1
Strain : Dehalococcoides sp. VS
Genome accession: NC_013552
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 1233170 - 1233799 bp
Length : 630 bp
Strand : +
Note : -

DNA sequence :
TTGCAAATAGCTGGTTGGAGAGTGAATCACAAAAGAGTCGAACGGATCTGGAGAAAGGAAGGGCTGAAGGTGCCCCAGAA
GCAATCCAAGCGCGGTAGACTATGGCTAAATGATGGTTCCTGCATCAGGTTGCGCCCCGAGCATAAGGATCATGTTTGGA
GCTACGATTTCGTGGCCGAGAGGACGATAAATGGCCGGGCGTTCCGGATATTGAATATCATTGATGAGTACACTCGCGAG
TGCCTGGCGATGAAGATTGGCCGGCGGATCACCTCCCAGGAGGTCATTGATAAGCTGTTCGAGCTATTCCTCTTGAGAGG
CATCCCGAAAAACATCAGGTCGGACAACGGCCCGGAATTCACGGCCAAGCAAATCAGGAACTGGCTGAATAGGATCGGTG
TAAATACTTTGTTCATTGAGCCGGGAAGCCCATGGGAGAACGGTTACATAGAATCATTCAACGGGAAACTGAGAGACGAA
CTGCTCAACCGGGAAATATTTTTTACCCTTACCGAGGCAAAAGTATTGATTGAAGAATGGAGGAAAGACTACAATCAAAT
ACGCCCGCACAGCGCATTGGGTTACAGACCACCGGCTCCAGAGGCCGTAATGAGCGCTGTACTAACTTAA

Protein sequence :
MQIAGWRVNHKRVERIWRKEGLKVPQKQSKRGRLWLNDGSCIRLRPEHKDHVWSYDFVAERTINGRAFRILNIIDEYTRE
CLAMKIGRRITSQEVIDKLFELFLLRGIPKNIRSDNGPEFTAKQIRNWLNRIGVNTLFIEPGSPWENGYIESFNGKLRDE
LLNREIFFTLTEAKVLIEEWRKDYNQIRPHSALGYRPPAPEAVMSAVLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 5e-28 41
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-28 41