Gene Information

Name : DhcVS_1309 (DhcVS_1309)
Accession : YP_003330736.1
Strain : Dehalococcoides sp. VS
Genome accession: NC_013552
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911-family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1206617 - 1206895 bp
Length : 279 bp
Strand : +
Note : -

DNA sequence :
ATGCCTAGAAAAGCTTTTACCGCGGAACAGATCATCAACAAGCTTCGTGAAGCCGAGCTGATTCTGAATCAGGGCACAAC
GGTGCCTGAAGCCTGCCGAAAGATTGGAGTTACCGATCAGACCTACTATCGATGGCGCAAGGAATATGGCGGCTTAAACG
TTGACCAGGCCAAGCGCCTTAAGGACCTGGAAAAAGAAAACGTCCAGCTAAAGCGCCTTGTGGCCGATCTTTCACTCGAT
AAGGCCATATTGAAGGAGGCGTCCCGGGGAAACTCCTAA

Protein sequence :
MPRKAFTAEQIINKLREAELILNQGTTVPEACRKIGVTDQTYYRWRKEYGGLNVDQAKRLKDLEKENVQLKRLVADLSLD
KAILKEASRGNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 1e-16 52
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-16 52
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-15 47
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-15 47
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-15 46
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-15 46
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-13 41