Gene Information

Name : Xcel_0700 (Xcel_0700)
Accession : YP_003325297.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 758893 - 759621 bp
Length : 729 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_3708 ABC transporter-related protein

DNA sequence : 
ATGTCCTCCCCCGTCATGCTCACGATGCGCGGGATCACCCGCGTCCACGGCCACGGCGCCGCCGAGGTGCACGCCCTGCG
CGGCGTCGACCTCGCCGTCGCGATGGGCGAGCTGGTCGCCGTCATGGGCCCCTCCGGCTCCGGCAAATCGACGCTGCTGC
ACCTCGCGGGCGGGCTCGACTCCCCGACGTCGGGCACCGTGCAGGTGGGGCGCGACGACGTCGGCGCCTTGGACGCCAAG
GGCCGCGCCCGCCTGCGACGCAAGCACGTCGGGTACGTGTTCCAGGACCTCAACCTCATCCCCGCGCTGACCGCGATCGA
GAACGTCACCCTGCCGCTCGAGCTCGACGGCGCCTCCGCCCGCAAGGCCCGTGCGACCGCGACCGCCGCGCTCGCCGAGG
TGGGCATGGACGGGCTCGAGGACCGGTTCCCGGACGACATGTCCGGCGGGCAGGCGCAGCGCGTCGCCATCGCCCGCGCG
CTCGTCGGGCCACGGCGGCTCCTGCTCGCCGACGAGCCCACGGGCGCCCTCGACTCCGTGACCGGCGAGGCCGTCATGCG
CGTCCTGCGCGCCCGCGTCGACGCCGGGGCCGCCGGGCTGCTCGTGACCCACGACGCCCGCCACGCCGCGTGGGCGGACC
GGATCGTGTTCCTGCGCGACGGGCGCGTCGTCGACGAGACCGGCTCCGCCGCCGGGGCCGAGACGCTGCTCGACGGGGCG
GCGCGCTGA

Protein sequence : 
MSSPVMLTMRGITRVHGHGAAEVHALRGVDLAVAMGELVAVMGPSGSGKSTLLHLAGGLDSPTSGTVQVGRDDVGALDAK
GRARLRRKHVGYVFQDLNLIPALTAIENVTLPLELDGASARKARATATAALAEVGMDGLEDRFPDDMSGGQAQRVAIARA
LVGPRRLLLADEPTGALDSVTGEAVMRVLRARVDAGAAGLLVTHDARHAAWADRIVFLRDGRVVDETGSAAGAETLLDGA
AR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xcel_0700 YP_003325297.1 ABC transporter NC_008702.1.4606598. Protein 3e-33 48
Xcel_0700 YP_003325297.1 ABC transporter CP001581.1.gene598.p Protein 3e-34 42
Xcel_0700 YP_003325297.1 ABC transporter NC_012469.1.7686878. Protein 1e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xcel_0700 YP_003325297.1 ABC transporter VFG2059 Protein 1e-16 41