Gene Information

Name : Xcel_0346 (Xcel_0346)
Accession : YP_003324943.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 408787 - 409695 bp
Length : 909 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit

DNA sequence : 
ATGGATCCGGCCCGCGGGAGACACGCCCAGCCCGACGCCTCCTCCGAGCAGCCGCCAGCGCAGGCCTCCGCCCGGGACCT
CGTCAAGACGTACGGGGCCGGGGAGACCGAGGTGCGGGCCCTCGACGGCGTGTCCGTGGACTTCGCGCGGGGCCGCCTCA
CGGCGATCATGGGGCCGTCCGGGTCGGGCAAGTCGACCCTCATGCACTGCATGGCCGGGCTCGACACGCCCACGTCCGGC
ACCGTCGTCGTCGACGACGTCGAGATCTCGTCGATGAGCCAGCGCGCGCTCACCCGGCTGCGGCGCACCCGCATCGGGTT
CGTGTTCCAGGCGTACAACCTCGTGCCCACGCTCACCGCCGAGGAGAACATCACCCTGCCCCTCGACATCGCGCGCGCCC
CCGTGGACCCCGCGTGGTTCGACGCCGTCGTCGACGCCGTCGGCCTGCGCTCCCGGCTGCGCCACCGGCCGAACGCCCTG
TCGGGCGGCGAGCAGCAGCGGGTCGCGTGCGCGCGTGCGCTGGTGAGCCGCCCGTCGGTGGTGTTCGCCGACGAGCCCAC
CGGCAACCTCGACTCGAAGAGCTCACGCGAGGTGCTGACGTTCCTGCGGCAGTCTGTCGACGAGCTCGGGCAGACGGTCG
TCATGGTCACCCACGACCCCCGCGCCGCCGCGTATGCGCACCGCGTGCTGCTGCTCGGCGACGGTCGCATCACCGCCGAC
CTCGACCACCCCAGCCGGGCCGAGATCCTCGCCGCCGTCGGCGCGGAGGACGACGACGACGCCAGGCCGGCGACCGGGCG
GTACGCCGCCGTGCCCGCGCCGCGGACAGGGCCGTTGGCGGTCGTGGAGGCTCCGCGGCGGGCGCGGCGGGCGCGGGTGG
ATGGCGACGGCGGCGGGGTGGAGTCGTGA

Protein sequence : 
MDPARGRHAQPDASSEQPPAQASARDLVKTYGAGETEVRALDGVSVDFARGRLTAIMGPSGSGKSTLMHCMAGLDTPTSG
TVVVDDVEISSMSQRALTRLRRTRIGFVFQAYNLVPTLTAEENITLPLDIARAPVDPAWFDAVVDAVGLRSRLRHRPNAL
SGGEQQRVACARALVSRPSVVFADEPTGNLDSKSSREVLTFLRQSVDELGQTVVMVTHDPRAAAYAHRVLLLGDGRITAD
LDHPSRAEILAAVGAEDDDDARPATGRYAAVPAPRTGPLAVVEAPRRARRARVDGDGGGVES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xcel_0346 YP_003324943.1 ABC transporter CP001581.1.gene598.p Protein 7e-50 48
Xcel_0346 YP_003324943.1 ABC transporter CP001581.1.gene798.p Protein 9e-43 45
Xcel_0346 YP_003324943.1 ABC transporter NC_008702.1.4606598. Protein 8e-35 44
Xcel_0346 YP_003324943.1 ABC transporter NC_012469.1.7686878. Protein 6e-41 41