Gene Information

Name : Xcel_3301 (Xcel_3301)
Accession : YP_003327859.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Unknown
Product : Integrase catalytic region
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3661014 - 3661952 bp
Length : 939 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: aav:Aave_2937 integrase, catalytic region

DNA sequence :
GTGATCGACTACGTGCGTCAGCACGCGGGTCGTTTCGGGGTCGAGCCGATCTTGACGGTGCTCGCCGAGCATGGCATCAA
GGTCGCCCCGAGCACGTACTGGGCCCACGCTGCCCGCGGCTTCGGTCCCACGAAGGCCGAGCTCGACGACGCGTTCGCTG
CGAACGAGGTCTACGACCTGTGGCGCCAGGCTCACGGCCTCTACGGGCGCCGCAAGCTGTGGAAGAGCGCCCACCGGGCC
GGGCACGGCTGGGGCCGCGACCAGATCGAACGGCTCATGAAGATCGTCGGGATCACTGGCGTCTCGCGTGCCCGCAGGAC
GACCGTGACGACGGTGCGTGACGACCGGGCACCGCGGCATCCGGACCACATCAAGCGGCGCTGGTCATGGCCCACCCGGC
CCGATCAGTGGTGGGTGGCCGACTTCACGTACGTGTGGACCCCGGTCGGGTTCGCCTACGTCTCGTTCATCACGGACGTC
TACTCTCGCCGGATCCTGGGCTGGAGAACCGCGACGACGAAGGAGACCTCGCTCGTGTCGTCCGCGCTCGAGCAGGCCCT
GTTCACGCGCCGACGCACGAACTACCAGTTCACCACCACCGGACTTGTCCATCACTCGGATGCCGGGTCTCAATACACGT
CGCTGGCGCTGACCGAGGCACTGCGCGAGGCGGGGATCACCGGATCGATCGGGACCGTGGGCGACGCGCTCGACAACGCG
CTCATGGAATCGACCATCGGCCTGTTCAAGACCGAGATCCACGCCTTCGCCACCGGGCCGTTCACCACCTGGCGGGACGT
GGAGAAGGCCACCGCCGCATGGGTCCACTGGTTCAACCACGACCGCCTCCACTCAGCGATCGGAGACATCCCGCCCATCG
AGTTCGAGACGGACCACTACGCTGCAACCACCAGCCCCGGCAACCTCGCCGCGGCCTGA

Protein sequence :
MIDYVRQHAGRFGVEPILTVLAEHGIKVAPSTYWAHAARGFGPTKAELDDAFAANEVYDLWRQAHGLYGRRKLWKSAHRA
GHGWGRDQIERLMKIVGITGVSRARRTTVTTVRDDRAPRHPDHIKRRWSWPTRPDQWWVADFTYVWTPVGFAYVSFITDV
YSRRILGWRTATTKETSLVSSALEQALFTRRRTNYQFTTTGLVHHSDAGSQYTSLALTEALREAGITGSIGTVGDALDNA
LMESTIGLFKTEIHAFATGPFTTWRDVEKATAAWVHWFNHDRLHSAIGDIPPIEFETDHYAATTSPGNLAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 3e-31 45
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 4e-31 45
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 7e-35 44
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-35 41
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-35 41
Z1198 NP_286733.1 transposase Not tested TAI Protein 1e-35 41
Z1638 NP_287141.1 transposase Not tested TAI Protein 1e-35 41
Z1221 NP_286756.1 transposase Not tested TAI Protein 8e-36 41