Gene Information

Name : Xcel_3261 (Xcel_3261)
Accession : YP_003327819.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 3619182 - 3620846 bp
Length : 1665 bp
Strand : -
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rsq:Rsph17025_3273 acetamidase/formamidase

DNA sequence :
ATGACCACCCCTGTCGTCACCATCCAGGACCTCGAGGTCACCTTCGCCACCGACGGCGGCGACGTCCGCGCCGTCGACGG
CGTCAGCCTGGAGGTCGCCCCCGGGGAGGTGCTGGCCGTCGTCGGCGAGTCCGGCTCGGGCAAGACCGTCACCGCCAAGA
CGATCCTCGGCCTGCTCCCCGAGACGGCCACGACGCGCGGCGCCGTCGTGCTGACCTCGACCGACGGCGGCTCGACCGAC
GTCGTGAACGTCAGCCCGGCGCGGCTGCGCGAGGCCCGCGGCCGCGACGTGGCCATGGTGTTCCAGGAGCCGTCCACGGC
CCTGAACCCGGTGTACACGGTGGGCTGGCAGATCGCCGAAGGGTTGCGCGCCCACCGCCGGGTGCCGCGGAAGGTCGCGC
GGGCGCAGGCGATCGAGGCGCTGCGACAGGTCGGCATCCCCGACCCGGAGCAGCGCGTCGACCACTACCCGCACCAGTTC
TCGGGCGGGCAGAAGCAGCGCATCGTCATCGCGATGGCGCTGGCCCTCGGGCCGGGCCTGATCGTCGCGGACGAGCCGAC
GACGGCGCTCGACGTCACGGTGCAGGCCGAGATCCTCGACCTGCTGCGACGGCTGCGCGACGAGACGGGAACCGCCATCG
TGCTCATCACGCACAACATGGGCGTCGTGGCCGATCTCGCCGACCGGGTGGCCGTCATGTACCGGGGCCGCGTCGTCGAG
CAGGCGGGGGTGCGCGAGCTGTTCGCGACGCCGCAGGCCGCGTACACCAAGGCCCTGCTCGGGGCCGTGCCGCGCATCGG
CGAGGGCCGTCCGCGGGCCGTCGTGCGGGCGGCGTCGCGGCCCGCCGGCTGGGAGTCTTCTGCGCCGGTCGTCGCCGCCA
CCGACCTGACCATCACCTACCCCGGGCGCTTCCGGCAGCCCGACTTCACGGCGGTGGACGGCGTCTCGCTGCAGATCCGT
CCCGGCGAGGTGCTGGGCCTGGTGGGCGAGTCCGGCTCGGGCAAGACGACGATCGCGCGCGCGATCGCCGGGCTGCAGCC
GGTCAGCGGCGGGTCGCTGAAGGTGCTGGGCACCGAGGTGGCGGGGGTGCACGCCCGCGACCTGCGTGCGCTGCGCCCGC
GGCTCGGGTTCGTGTTCCAGGACCCGGCGACGTCGTTCAACCCGCTGCTGACCATCGCCGAGTGCGTGGCCGAGCCGCTC
GTGGTCCACGGACGCTTCCGCACGCCGGCCGCCGCACGCGCTCGCGTCGACGAGCTGCTCGAGGCGGTCCAGCTCCCGCG
CTCGTACGGCGACCGGTTCCCGCACGAGCTGTCCGGCGGGCAGCGGCAGCGGGCGTCGCTGGCGCGGGCCCTGGCCCTCG
ACCCCGAGCTGCTCATCGCGGACGAGCCGACGTCGGCGCTCGACGTGTCGGTGCAGGCGCGCGTGCTGGACCTGTTCGCG
GACCTGCAGCGGTCGCTCGGGTTCGCGTGCCTGTTCGTCTCGCACGACCTCGCCGTCGTCGACCTGATCGCCGACCGCAT
CGCCGTCCTCTACCACGGCCGGCTGGTCGAGGAGGGGCCGGGAGCGGACCTGCTGGAGCACCCGCGGGAGGACTACACGC
GCCGCCTGCTGGCGTCGCTGCCCATCCCCGACCCGGAGGCCCAGCGCGCACGCCGCACCCCCTGA

Protein sequence :
MTTPVVTIQDLEVTFATDGGDVRAVDGVSLEVAPGEVLAVVGESGSGKTVTAKTILGLLPETATTRGAVVLTSTDGGSTD
VVNVSPARLREARGRDVAMVFQEPSTALNPVYTVGWQIAEGLRAHRRVPRKVARAQAIEALRQVGIPDPEQRVDHYPHQF
SGGQKQRIVIAMALALGPGLIVADEPTTALDVTVQAEILDLLRRLRDETGTAIVLITHNMGVVADLADRVAVMYRGRVVE
QAGVRELFATPQAAYTKALLGAVPRIGEGRPRAVVRAASRPAGWESSAPVVAATDLTITYPGRFRQPDFTAVDGVSLQIR
PGEVLGLVGESGSGKTTIARAIAGLQPVSGGSLKVLGTEVAGVHARDLRALRPRLGFVFQDPATSFNPLLTIAECVAEPL
VVHGRFRTPAAARARVDELLEAVQLPRSYGDRFPHELSGGQRQRASLARALALDPELLIADEPTSALDVSVQARVLDLFA
DLQRSLGFACLFVSHDLAVVDLIADRIAVLYHGRLVEEGPGADLLEHPREDYTRRLLASLPIPDPEAQRARRTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-62 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-62 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 6e-62 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-62 41
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-88 41