Gene Information

Name : Xcel_3242 (Xcel_3242)
Accession : YP_003327800.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : 6.1.1.11
Position : 3592383 - 3593657 bp
Length : 1275 bp
Strand : -
Note : KEGG: bsu:BSU00130 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like

DNA sequence :
GTGATCGACCTTCGTCTGCTGCGTGACAACCCCGACGTCGTCCGCGAGAGCCAGGTGGCCCGCGGCGACGACCCCGCCCT
CGTGGACGCGGCGCTCGACGCCGACGCCCGCCGTCGTGCCTCCCTGGCGGCCTTCGAGGAGCTGCGCGCCGAGCAGAAGG
CCATGGGCAAGAAGGTCGCCCAGGCCCAGGGCGACGAGAAGCAGGCGCTGCTCGCCCGCACCCGGCACCTCTCCGACGAG
GTCAAGTCGCGCTCGAAGGACGCCGACGACGCCGCAGCCGCGCTCGACGCCGCCCTGTGGAAGATCTCGAACGTCGTCGA
GGGCGCGCCCGCCGGCGGGGAGGACGACTACGTCGTCATCCAGCACGTCGGCACCCCCCGCGACTTCGCCGCCGAGGGAT
TCGAGCCGCAGGACCACCTCGCCCTCGGCGAGGGCCTGCGCGCCATCGACACCGCGCGCGGCGCGAAGGTCTCGGGCACC
CGGTTCTACTTCCTCACCGGCATCGGCGCACGCCTCGAGCTCGCCATCCTCAACGCCGCCATGGACCAGGCCGTCCAGGC
CGGGTTCACCCCCGTCATCACACCCACCCTGGTCAAGCCGGAGACCATGCGCGGCACCGGGTTCCTCGGCGCGCACGCCG
ACGAGGTCTACCGCCTCGAGAAGGACGACCTCTACCTGGTCGGCACCTCGGAGGTGGCGCTCGCGGGCTACCACGCCGAC
GAGATCATCGACCTCGCGGACGGCCCGGCGCGCTACGCCGGGTGGAGCGCCTGCTACCGCCGCGAGGCGGGCTCGGCGGG
CCGGGACACGCGCGGCATCATCCGGGTGCACCAGTTCCACAAGGTCGAGATGTTCAGCTACTGCCGCCCGGAGGACGCCG
CCGAGGAGCACCAGCGGCTGCTCGCCTGGGAGGAGGCCATGCTCGCCAAGGTCGAGCTGCCCTACCGGGTCATCGACACC
GCGGCGGGGGACCTCGGGTCGAGCGCCGCCCGCAAGTTCGACTGCGAGGCGTGGCTGCCCACCCAGAACCGCTGGCTCGA
GCTCACCTCGACGTCGAACTGCACCACGTTCCAGGCCCGCCGCCTGGGCGTGCGGGAGCGCACCGCCGACGGGTCGACCC
GCAACGTCGCCACCCTCAACGGCACGCTCGGCACCACGCGCTGGATCGTCGCCATCCTGGAGAACCACCAGCAGGCGGAC
GGCTCGGTCCGCGTCCCCGAAGGGCTGCGCCCCTACCTGGGCGGCCTGGAGGTCCTGGAGCCCTTCGGTGGTTGA

Protein sequence :
MIDLRLLRDNPDVVRESQVARGDDPALVDAALDADARRRASLAAFEELRAEQKAMGKKVAQAQGDEKQALLARTRHLSDE
VKSRSKDADDAAAALDAALWKISNVVEGAPAGGEDDYVVIQHVGTPRDFAAEGFEPQDHLALGEGLRAIDTARGAKVSGT
RFYFLTGIGARLELAILNAAMDQAVQAGFTPVITPTLVKPETMRGTGFLGAHADEVYRLEKDDLYLVGTSEVALAGYHAD
EIIDLADGPARYAGWSACYRREAGSAGRDTRGIIRVHQFHKVEMFSYCRPEDAAEEHQRLLAWEEAMLAKVELPYRVIDT
AAGDLGSSAARKFDCEAWLPTQNRWLELTSTSNCTTFQARRLGVRERTADGSTRNVATLNGTLGTTRWIVAILENHQQAD
GSVRVPEGLRPYLGGLEVLEPFGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 1e-62 43