Gene Information

Name : Xcel_3166 (Xcel_3166)
Accession : YP_003327725.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 3507230 - 3508780 bp
Length : 1551 bp
Strand : -
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bpe:BP2591 ABC transport protein, ATP-binding component

DNA sequence :
ATGACGCTGCTCGAGGCGCGCGGGATCACCGTGACCGGGCCGGAGGGCGTCATCGTGCGCGGCGTCGACCTCGCGGTCGC
GCCCGGGCGCACCGTCGCCGTCGTCGGCGAGTCCGGCTCGGGCAAGTCGCTCACCGCCAAGGCGCTCACCGGGCTCCTGC
CCCGCGGCCTGCGGGCCGACGGCGCGGCGTCGCTCGACGGGCGCCCGCTCGACCTGCACGCCGCCGAGCGCACGTGGCGC
AGGGTCCGCGCGGGCGGCGTCGTGCTGCTGCTCCAGGACCCGTTCACCAGCCTCTCGCCCGTGCACCGCTGCGGCGGTCA
GGTGGCCGAGGCCCTGCCCGACGCCGTCCGGCGCGACCGGCGGGCCCGGCGTGCGGCGGTCGCGGCGGCGCTCGACGAGG
TGGGGCTGCCGACCCGCGTCGCCCGCGCCTACCCGTTCGAGCTCTCCGGCGGGCAGCGCCAGCGCGTCGCGATCGCCGCA
GCGCTCGCCGCCCGCCCCCGCGTGCTCGTCGCCGACGAGCCCACCACGGCCCTCGACGTCACCACGCAGGCCGAGATCCT
CGACCTGCTCGGGGGCCTCCAGCAACGCCACGGCCTGGGCCTGGTGCTCATCACCCACGACCTGCGCCTCGCACGCGAGC
GCGCCGACGAGGTCGCCGTGATGCACGGCGGGCAGGTCGTCGAGGCGGGCCCCGCAGCCGACGTGCTCACGACGCCGACG
CACGCCTACACGCGGCGGCTGCTGGCCGCGGTGCCGTCGCTGGACGCGCCCCGCCCCCGTGCGGTCGAGCCGGTCGAGAC
CACCCCGCACCCCGCGGGCGCCCCGGTCCTCCGCGCGCGCGAGGTGCGCCGTGCGTTCGGGGACGTCGTCGCCCTGCGCG
GGGTCGACGTCGACGTCGCGGTGGGCGAGTGCGTCGCCGTCGTCGGCGAGTCCGGCTCGGGCAAGACGACGCTGGCCCGC
TGCGTCGTCGGCCTCGAGACGCCCGACGCCGGGGCCGTCGAGCTGGCCGGGGCAGCGTTGGGACGTGACCCGCGCGCCGT
GCAGGTCGTGTTCCAGGACCCGTACTCCGCGCTCAACCCGGCACTGACGATCGGGGACCAGCTCGCCGAGGCGCTGCGAG
CGGGCGGCCGCCCCGCGTCCGAGGTGCCGGAGCTCCTCGCGCAGGTCCACCTGCCGGCCGGGTATGCCGCGCGGCGCCCG
CGCGCCCTGTCCGGCGGCGAACGCCAGCGCGTCGCGATCGCCCGTGCGCTGGCCCCGCGCCCCCGGCTGCTGGTGTGCGA
CGAGCCCGTCTCGGCGCTCGACGTCTCCGTGCAGGCCCAGGTGCTCGACCTGCTGGTGGACCTGCGCGACCGCCTGGGCC
TCGCGCTGCTGTTCGTCAGCCACGACCTCGCCGTCGTCCGGCAGGTCGCACACCGGGTGGTGGTCATGAAGGACGGCGAG
GTGGTCGAGCGGGGTCCGGTGGCCCAGGTGCTCGGCGACCCGCAGCACGAGTACACGCGGCGGCTGCTCGCCTCCGTGCC
CGGAGCCCGTACGCAGGAGGCCCACGCATGA

Protein sequence :
MTLLEARGITVTGPEGVIVRGVDLAVAPGRTVAVVGESGSGKSLTAKALTGLLPRGLRADGAASLDGRPLDLHAAERTWR
RVRAGGVVLLLQDPFTSLSPVHRCGGQVAEALPDAVRRDRRARRAAVAAALDEVGLPTRVARAYPFELSGGQRQRVAIAA
ALAARPRVLVADEPTTALDVTTQAEILDLLGGLQQRHGLGLVLITHDLRLARERADEVAVMHGGQVVEAGPAADVLTTPT
HAYTRRLLAAVPSLDAPRPRAVEPVETTPHPAGAPVLRAREVRRAFGDVVALRGVDVDVAVGECVAVVGESGSGKTTLAR
CVVGLETPDAGAVELAGAALGRDPRAVQVVFQDPYSALNPALTIGDQLAEALRAGGRPASEVPELLAQVHLPAGYAARRP
RALSGGERQRVAIARALAPRPRLLVCDEPVSALDVSVQAQVLDLLVDLRDRLGLALLFVSHDLAVVRQVAHRVVVMKDGE
VVERGPVAQVLGDPQHEYTRRLLASVPGARTQEAHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 6e-47 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-44 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-44 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-44 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-44 43