Gene Information

Name : Xcel_2174 (Xcel_2174)
Accession : YP_003326750.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2340416 - 2341255 bp
Length : 840 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3413 ABC Fe+3-siderophore transporter, ATPase subunit

DNA sequence : 
ATGACGGACGAAACGTTGGCCCCGTCCCGGCCCGCCGCGAGTCCCTCACAGCCGCCCGCCCTGCAGGCGCAGGACGTGCG
CATCGGGTACGACGGCCTGCTGGTCGTCGACGGGCTCAGCCTGGACCTGCCCGCCGGCAAGGTCACCGCCATCGTCGGCC
CCAACGCGTGCGGCAAGTCGACGCTGCTGCGCGGCCTGGCCCGGCTGCACCCGCTCGAGGGCGGCACCGTGCTGCTCGGG
GGGCGCGACGCCGCCGGGATGTCCCGCAGGGAGCTCGCGCGGACGCTCGGGGTGCTCCCCCAGTCCTCGATCGCGCCTGA
CGGCATCCACGTCGCCGAGCTCGTGGGACGGGGCCGCTACCCCCACCAGGGCTGGTTCGGGCGCCACACGAGCGGCGACG
ACGCCGTCGTCGCCCGGGCGATGGCGGCGACCGGCATCGCCGACCTCGCCGACCGGCCCGTGGCCGAGCTCTCCGGCGGG
CAGCGGCAGCGCGTGTGGATCGCGATGGTGCTGGCCCAGGAGACCGACATCGTGCTGCTCGACGAGCCCACGACGTACCT
CGACGTCGCACACCAGGTCGACCTGCTCGAGCTGCTCGTCGACCTGAACGCCTCCCGCGGGACCACCGTGGTGATGGTGC
TGCACGAGCTGAACCTCGCCGCCCGGTATTCCGACCACCTCGTCGTGATGCGCGGGGGCAGGGTCGTCGCCCAGGGCGAG
CCGTCCGCGGTCCTGACCGAGGCGACCGTGCAGGCCGCGTTCGAGCTCCAGGCGAAGGTGGTGCCCGACCCGGTCTCCGG
GTCGCCGATGGTGGTCCCGCTCGGCCGACGCCCGGCCTGA

Protein sequence : 
MTDETLAPSRPAASPSQPPALQAQDVRIGYDGLLVVDGLSLDLPAGKVTAIVGPNACGKSTLLRGLARLHPLEGGTVLLG
GRDAAGMSRRELARTLGVLPQSSIAPDGIHVAELVGRGRYPHQGWFGRHTSGDDAVVARAMAATGIADLADRPVAELSGG
QRQRVWIAMVLAQETDIVLLDEPTTYLDVAHQVDLLELLVDLNASRGTTVVMVLHELNLAARYSDHLVVMRGGRVVAQGE
PSAVLTEATVQAAFELQAKVVPDPVSGSPMVVPLGRRPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-64 57
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-53 50
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-50 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-53 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-53 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-53 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-53 48
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-62 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-62 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 45
irp6C NP_938506.1 ATP-binding protein Irp6C Not tested Not named Protein 5e-31 42
irp6C YP_005124377.1 ATP-binding protein Irp6C Virulence Not named Protein 4e-31 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xcel_2174 YP_003326750.1 ABC transporter BAC0164 Protein 1e-53 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xcel_2174 YP_003326750.1 ABC transporter VFG0925 Protein 1e-62 51
Xcel_2174 YP_003326750.1 ABC transporter VFG1042 Protein 1e-53 50