Gene Information

Name : Xcel_2172 (Xcel_2172)
Accession : YP_003326748.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Virulence
Product : transport system permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2338328 - 2339377 bp
Length : 1050 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: oan:Oant_4083 transport system permease protein

DNA sequence : 
ATGCTTACCTCACCTGCGGCGGAGGCGCTCGCCCCTGCCGCACGGAGACCCCGGCGGTCCCGGCCCCGTGCGGGGGTCGT
GGTCGCCATCGCCGTCGTCCTGGCCCTCGTCGTGGTCGCGAGCCTCCTGCTCGGCGTGCGCTCCGTGTCCCCCGACAAGG
TCTGGGCCGCCCTGTGGCCCGGCGCGGCAGGCCACGACCTGACCGACCCCGACCAGCGCGTCGTCGCCCAGCTCCGGGTG
CCGCGCACGGTGCTCGGCGTGCTCGCCGGCCTCGCGCTCGGCTGCGTCGGCACCGTGATCCAGGGCGTCACCCGCAACCC
CATCGCCGATCCCGGGCTGCTCGGCATCACCCCCGGCGCTTCCCTCGCGGTCGTCTGCGCCGTCTCGTTCCTCGGCGTCA
CGTCGCCGCTGGGCTTCGTGTGGTTCGCCTTCGCCGGCGCGGCCGCCGCCGCCGTGATCGTGTTCTCGATCGGCCGGGCC
CAACCCGTGCGCCTCGCCCTCGTCGGCGCCGCGCTCACGGCGTTCATCACGCCGATCGTCGCGCTGGTGCTGCTGTCCGA
CGTGAACGCGTTCAACCAGTACCGCTTCTGGGCGGTCGGCTCGCTGACGGGCCGCGGCCTCGACACCGCCGCCGCCCTGT
GGCCGTTCCTCGTCGTCGGCATCCTGCTCTCGGCCCTGCTCGCGCGCCGGCTGACGCTGCTGGCCATGGGCGACGACGTC
GCCGCCGCCCTCGGGCAGAGCGTCGGCGTCACGCGCGGCCTGGCTGCCGCCGCGATCGTGCTGCTGGCCGGGACCGCGAC
GGCGTTCGCCGGACCCATCGCCCTCGTCGGCCTCGTCGTCCCGCACGCCGCACGCCGCCTGGTCGGCAGCGACTACCGGT
GGATCATGCCCGTCGCCGCGCTGCTCGGCCCGGTCGTGCTGCTCGGCGCGGACGTCATCGGGCGCCTCATCGTGCCCAAC
TCCGAGCTCGAGGCCGGCGTCGTCTCCGCGTTCATCGGCGCGCCCGTGCTCGTCGCCGTCGCGCGCGGCCGGTCCGTGGC
GGGGGTGTGA

Protein sequence : 
MLTSPAAEALAPAARRPRRSRPRAGVVVAIAVVLALVVVASLLLGVRSVSPDKVWAALWPGAAGHDLTDPDQRVVAQLRV
PRTVLGVLAGLALGCVGTVIQGVTRNPIADPGLLGITPGASLAVVCAVSFLGVTSPLGFVWFAFAGAAAAAVIVFSIGRA
QPVRLALVGAALTAFITPIVALVLLSDVNAFNQYRFWAVGSLTGRGLDTAAALWPFLVVGILLSALLARRLTLLAMGDDV
AAALGQSVGVTRGLAAAAIVLLAGTATAFAGPIALVGLVVPHAARRLVGSDYRWIMPVAALLGPVVLLGADVIGRLIVPN
SELEAGVVSAFIGAPVLVAVARGRSVAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 2e-23 41
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 2e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xcel_2172 YP_003326748.1 transport system permease protein VFG0926 Protein 7e-21 45