Gene Information

Name : Xcel_1616 (Xcel_1616)
Accession : YP_003326198.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1752862 - 1753554 bp
Length : 693 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_3234 ABC transporter related

DNA sequence : 
ATGACAGATCCGCTGATCACCGTCCGTGATCTCCGCAAGACCTACGGGTCGGGCCCGACGGCCTTCGAGGCGCTGCGCGG
CGTCGACCTCGACATCCACCGCGGCGAGTCGCTCGCCATCGTCGGCAAGTCCGGTTCGGGCAAGTCGACGCTCATGCACC
TGCTCGCCCTGCTCGACCGGCCGTCGTCGGGCTCGATCACCCTCGACGGCATCGAGACCTCCCGCCTCGGCGCGCGCGAG
CTCAACAAGACCCGCAACGAGATGTTCGGCTTCGTCTTCCAGCAGTTCTTCCTCACGCCGCAGACGAGCGTGCTCGACAA
CGTGACGATGCCGCTGACCATCGCCGGCGTGCCCGCCCGCGAGCGCCACGCCCGCGGCATGGCGGCGCTCGAGCAGCTCG
GCATCGCGGACAAGGCCGGCAACAAGGCCAACGACCTGTCGGGCGGGCAGAAGCAGCGCGTGGTCATCTCGCGCGCGCTG
ATCAACCGGCCCCAGGTGATCTTCGCCGACGAGCCGACGGGCAACCTCGACTCCGCGACGGGCGAGGTGGTCGAGGAGAT
CCTGTTCGACCTCAACCGCCGCCAGGGCATCACGCTCGTCGTCGTCACGCACGACCACGAGCTGGCGTCCCGCTGCGACC
GCAGCGTCGTCGTGCGCGACGGACTCTTCGACTCCCTGGAGGTGGCCGCATGA

Protein sequence : 
MTDPLITVRDLRKTYGSGPTAFEALRGVDLDIHRGESLAIVGKSGSGKSTLMHLLALLDRPSSGSITLDGIETSRLGARE
LNKTRNEMFGFVFQQFFLTPQTSVLDNVTMPLTIAGVPARERHARGMAALEQLGIADKAGNKANDLSGGQKQRVVISRAL
INRPQVIFADEPTGNLDSATGEVVEEILFDLNRRQGITLVVVTHDHELASRCDRSVVVRDGLFDSLEVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xcel_1616 YP_003326198.1 ABC transporter NC_008702.1.4606598. Protein 4e-37 45
Xcel_1616 YP_003326198.1 ABC transporter NC_012469.1.7686878. Protein 9e-47 44