Gene Information

Name : Xcel_1448 (Xcel_1448)
Accession : YP_003326037.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1572546 - 1573340 bp
Length : 795 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_3149 ABC transporter related

DNA sequence :
ATGCTCCCCACGCTCACCGCCGAGGCGGTCCGGCTCGGCTACGGCTCGCGCACCGTCGTCGACGGCCTGACCTTCGCCGT
TCCCGACGGCGGGTTCACCGTCATCATCGGGCCCAACGCCTGCGGCAAGTCCACGCTCCTGCGGGCGCTGGGACGCATGC
TCGCCCCCGCCGCCGGCCAGGTGGTGCTCGACGGCGCCGACATCCGCACACTGCCCACCAAGCAGGTCGCGCGGAAGATC
GGGCTGCTCCCCCAGTCGCCCGTCGTCCCCGAGTCCGTCACCGTCGCGGACCTGGTCGCCCGGGGCCGCTACCCGCACCA
GCGCCTGCTGCGGCAGTGGACCGCCGACGACGAGACGGCGGTCTCGGACGCCCTCGACGAGGTCGGGATGCGCGAGCACG
CCGACCGGTTCGTCGATGAGCTCTCCGGCGGGCAGCGGCAGCGCGCGTGGATCGCGATGACCCTTGCGCAGCAGACCCCC
GTCGTGCTGCTCGACGAGCCGACGACCTTCCTCGACATCGCCCACCAGCTCGACGTCCTCGACCTGTGCGCCCGCCTGCA
CGAGAACGGCCGCACCCTCGTCGCCGTCCTGCACGACCTCAACCTGGCCGCCCGCTACGCCACGCACCTCGTCGCGATGC
GCGACGGGCGGATCGTCGCGCAGGGCCCCGCGGAGGACGTCCTGACGCCGGACCTGCTGCGCGACGTGTACGACCTGGAC
GCGCGCGTGATCCCCGACCCCGAGAACGGCAGGCCCCTCGTCGTGCCCCGCGACCGCCGGCGGGTCCTCGCATGA

Protein sequence :
MLPTLTAEAVRLGYGSRTVVDGLTFAVPDGGFTVIIGPNACGKSTLLRALGRMLAPAAGQVVLDGADIRTLPTKQVARKI
GLLPQSPVVPESVTVADLVARGRYPHQRLLRQWTADDETAVSDALDEVGMREHADRFVDELSGGQRQRAWIAMTLAQQTP
VVLLDEPTTFLDIAHQLDVLDLCARLHENGRTLVAVLHDLNLAARYATHLVAMRDGRIVAQGPAEDVLTPDLLRDVYDLD
ARVIPDPENGRPLVVPRDRRRVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-61 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-62 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-62 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-62 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-62 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-53 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-51 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-57 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-57 45
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xcel_1448 YP_003326037.1 ABC transporter BAC0164 Protein 7e-54 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xcel_1448 YP_003326037.1 ABC transporter VFG0925 Protein 4e-67 56
Xcel_1448 YP_003326037.1 ABC transporter VFG1042 Protein 7e-54 48