Gene Information

Name : Xcel_1062 (Xcel_1062)
Accession : YP_003325651.1
Strain : Xylanimonas cellulosilytica DSM 15894
Genome accession: NC_013530
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1141428 - 1142216 bp
Length : 789 bp
Strand : -
Note : KEGG: azo:azo3963 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
ATGGCCACCCCCACTTCTGCCGATGTCCGCGCCGCCACCACCCCCGCGGCCACCCCCCGCGCCGACGGCCGCGCCCCCGA
CGAGCTGCGGGCCGTGAAGATCACGCGCGGCTGGCTCGACGCCGCCGAGGGGTCGGTGCTGGTCGAGTTCGGCGGCACCC
GGGTGCTGTGCGCGGCGTCGTTCACGGAGGGCGTGCCGCGCTGGAAGAAGGGCTCGGGCGAGGGCTGGGTGACCGCCGAG
TACGCGATGCTGCCCCGCGCCACCAACACCCGCTCGGACCGCGAGTCGGTCAAGGGCCGGGTCGGCGGCCGCACGCACGA
GATCTCGCGACTGATCGGGCGCTCGCTGCGCGCGATCATCGACGTCTCCGCGCTGGGCGAGAACACGATCGTGCTGGACT
GCGACGTGCTGCAGGCCGACGGCGGCACGCGGACCGCGGCGATCACGGGCGCCTATGTGGCGCTGGCCGACGCCGTCGCG
TGGGGGCGCCGGCACGGCCACATCAAGGGTGGCAAGGAGGTGCTGACGGACTCGGTGAGCGCGGTGAGCGTCGGCATCGT
CGACGGCGTGCCGATGCTGGACCTGCCGTACGTCGAGGACGTGCGCGCGGGCACCGACATGAACGTGGTGGTCACCGGCT
CGGGCACGTTCGTCGAGGTGCAGGGTACGGCCGAGCACGGCGCGTTCGACCGGGCCGAGCTGGACGCGCTGCTGGACCTC
GCCGTCGCGGGGAACGCGCGGCTCGCCGAGCTGCAGCGCGCAGCCCTGGCCGAGGAGCCGGCCCGATGA

Protein sequence :
MATPTSADVRAATTPAATPRADGRAPDELRAVKITRGWLDAAEGSVLVEFGGTRVLCAASFTEGVPRWKKGSGEGWVTAE
YAMLPRATNTRSDRESVKGRVGGRTHEISRLIGRSLRAIIDVSALGENTIVLDCDVLQADGGTRTAAITGAYVALADAVA
WGRRHGHIKGGKEVLTDSVSAVSVGIVDGVPMLDLPYVEDVRAGTDMNVVVTGSGTFVEVQGTAEHGAFDRAELDALLDL
AVAGNARLAELQRAALAEEPAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-57 66