|
Name : Tter_1650 (Tter_1650) Accession : YP_003323378.1 Strain : Genome accession: NC_013525 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1781811 - 1784171 bp Length : 2361 bp Strand : - Note : KEGG: gme:Gmet_1777 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicase; helicase domai DNA sequence : ATGAAGACTGAAGAACTAGCAGCAAAGCTAAAAAATATTCTTTTATTGGAGCAGCGCCGCGGCTACAACAACAAGGCCGT ATTGGGTGGCGTAGAAGCTTTTATTCAGAAGACGGTTCTCCCTCAGGCTTCTGATGATGACCCACAGGCTAAGCGTATTC TTAAGGCATCCGAGAAGCTATTAGGGTATTCGACTTGTGCACCGGAAGAGCGCTCAACCAAAGTAAAGGAAGCGCTGGAT CTGTTGGATGGTAAGGCTTCTTCTGTGTTCCCACTTCCCAACATAAGACAAGCTCCGTCAAGGAGTGTCCCTGATCTCGA AAAGCCGATATCATCGATGCCTGGGGTTGGTCAAAGAAGAGCAGCTTTATTTGGCAGGCTGGGAATTCATCTTATAAGAG ATGCACTCGAGTATTATCCACGTGAGTACCATGATAGATCTAATCTTCGAAAGATAGCAGAATTGCAATTTGGAAACACG GAGACCTTTATAGCAAAGGTTAAGGAAGTTTCTGTTCGCAAGCTATCGAACAATCTTAACCTCTTAACTGCTCGACTTCA GGATGAGACAGGTTTTATTGATGCAACATGGTTCTCACGAGGTTTTGTGAGGCGTGACCTTGAACCTGGTATGGAGATAA TCGTTACAGGCAAGGTGGGGCAGTTTCTCGGGAAGTTAAAGGTGGAGTCTCCCGAGTATGAGCATCTGGACAAGAGTCTG CTCCACTCAGGCAGAATAGTGCCTATTTACAGATCCACAGAAGGACTAAACAACAAGCTACTTCGAAGTGTGATACACGA TATAGTTGCCTATCACTCTGTGCGCATAGAAGACCATCTGCCTCAACATCTTATTGATGAGCTCTCGTTACTGGATCTTG GAGATGCACTTTACCAAATACACTTCCCCGATTCCTGGGATCAGCTCGAGGCTGCCCGCAGAAGGCTTGCGTTTGATGAA TTCCTAGAAATACAGCTTGGGGCCCTAATGAAACAAGCAGTTAGGCGTAGATCCAAGGGTGCCCTTGCCCTCGATGTTCG CAAGCCACAGATAGGAGAATTCCTAACTAATCTTCCATTCAGGCTTACCGGAGCACAGGAAAGAGTCATACAGGAGATCA TGCATGATCTTGAGTCGGATGTGCCAATGAACAGGTTACTCCAGGGAGATGTTGGGTCAGGAAAGACAGTGGTAGCTGCT TCGGCCCTGATAACTGCTTTTGCTAATGGTTATCAGGGGGCTATCATGGCGCCTACCGAGATACTAGCCGAACAGCATTA TAAGGGTATATCTAGACTCGTCTCGGTTCTAGGAGAGGATGCTCCTAAGGTTTCCTTGCTTACCGGTAGTATCAAGGGCA AGGAAAGGGATGATCTATATCAAGCTGTTGAACAGGGTGAGATCGATATCCTTATAGGAACTCATGCTCTGATACAAGAA GGAGTGAGATTTAACAACCTCGCAGTATGTGTAGTCGATGAGCAACATAGATTCGGAGTTGAGCAAAGAGCAGCCTTAAG AGCCAAGGGCGTGAACCCCCATCTGCTGGTAATGACAGCTACCCCCATACCTAGAAGTCTTGCCCTCACTATATACGGAG ACCTGGATCTCTCTGTATTGGATGAGATGCCCCCAGGAAGGCAACCAATACAGACTTTTGCGCTAACTCCTGAGCAGCGA AGCTGGGCTTATAACTTCCTCAGAGAAGAGGTAGAGCGAGGAAGGCAAGCATACATAATATGTCCGCTAGTCGAGGAATC AGAGAAAATAGAAGCTAAGGCTGCAATTGAAGAATATGAGCGCTTGCAGAAATATGTTTTCCCAGATCTTCGTCTTGGTT TGCTGCATGGGAGAATGAAGCCCAGGGAAAAGGATGAGGTGATGGAGAGGTTTCGCCTTGGCGAGTTGCAGGTGCTCGTT TCAACTGCAGTGGTCGAGGTTGGGATAGACGTGCCCAATGCTACAGTCATGCTGATAGAGGGAGCGGACAGATTTGGACT TGCCCAATTGCATCAGTTCAGAGGCAGAGTCGGAAGGGGTACTGAAAAGTCTTATTGCTTGTTACTCTCGGATTCGCCCT CTGAGGATGCTCGGAAGAGACTTGAGATAGTTCAAGAATGTAGCGATGGTTTCGTCTTAGCTGAGGAGGACCTGAAGATG AGAGGTCCAGGTGAGTTCTATGGTATAAGGCAATCAGGACAGATAAACCTGAAGGTAGCTAAGTTGTCAGATTTCGGTCT TTTGGAGGAAACTCGCAAAATAGCTGCTGAGCTTCTGGAAGATGATCCAGATCTTAGGCATTACCCTAAACTGAGGAGCA GAGTTGTAGAGAGAATGAAGACACTTTCAGAGGCCAATTGA Protein sequence : MKTEELAAKLKNILLLEQRRGYNNKAVLGGVEAFIQKTVLPQASDDDPQAKRILKASEKLLGYSTCAPEERSTKVKEALD LLDGKASSVFPLPNIRQAPSRSVPDLEKPISSMPGVGQRRAALFGRLGIHLIRDALEYYPREYHDRSNLRKIAELQFGNT ETFIAKVKEVSVRKLSNNLNLLTARLQDETGFIDATWFSRGFVRRDLEPGMEIIVTGKVGQFLGKLKVESPEYEHLDKSL LHSGRIVPIYRSTEGLNNKLLRSVIHDIVAYHSVRIEDHLPQHLIDELSLLDLGDALYQIHFPDSWDQLEAARRRLAFDE FLEIQLGALMKQAVRRRSKGALALDVRKPQIGEFLTNLPFRLTGAQERVIQEIMHDLESDVPMNRLLQGDVGSGKTVVAA SALITAFANGYQGAIMAPTEILAEQHYKGISRLVSVLGEDAPKVSLLTGSIKGKERDDLYQAVEQGEIDILIGTHALIQE GVRFNNLAVCVVDEQHRFGVEQRAALRAKGVNPHLLVMTATPIPRSLALTIYGDLDLSVLDEMPPGRQPIQTFALTPEQR SWAYNFLREEVERGRQAYIICPLVEESEKIEAKAAIEEYERLQKYVFPDLRLGLLHGRMKPREKDEVMERFRLGELQVLV STAVVEVGIDVPNATVMLIEGADRFGLAQLHQFRGRVGRGTEKSYCLLLSDSPSEDARKRLEIVQECSDGFVLAEEDLKM RGPGEFYGIRQSGQINLKVAKLSDFGLLEETRKIAAELLEDDPDLRHYPKLRSRVVERMKTLSEAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-94 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tter_1650 | YP_003323378.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 2e-98 | 43 |
