Gene Information

Name : Tter_1349 (Tter_1349)
Accession : YP_003323078.1
Strain :
Genome accession: NC_013525
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1457643 - 1460105 bp
Length : 2463 bp
Strand : -
Note : PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Torsin; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: bha:BH0103 class III stress response-related ATPase

DNA sequence :
ATGAGTGATAGAGGCGAACGCTTCGATCGATTTACTGAGAGGGCACGTAAGGTTCTGAGCTTGGCCCATGAGGAAGCAGC
GCGCTTTAATCATAACTATATTGGCACCGAGCATATACTTCTAGGTCTGGTGCGTGAGGGTGATGGTGTAGCTGCGCGCG
TGCTTGCGAGCATGGGAGTCCAGCTCCAAAAGGTAAGAGCTGCTGTAGAGTTTATCATAGGCAGGGGTGAGCGACCGCCT
CAGGGTGAAATTGGGTTGACTCCTCGTGCCAGAAGGGTAATAGAGCTCGCCTTTGATGAGGCCAAAAGGCAGAATCATCA
TTACATAGGTACCGAACACCTCCTGCTTGGCCTAGTGCGAGAAGGTGAGGGCATAGCAGCTGGGGTTCTCGAGAGCCTGG
GCGTGAACCTTGAGAAGGTAAGGGCTCAGGTGCTGCAGGTTATAAATCAGAGCAGTGCCTACTCGCAGCAGGGTAAAGCT
GCTACAAAGACACCCTACATAGATGCTCTAGGCACTGACCTGACTGAGCTTGCAAGGAATGATAAGCTCGATCCAATAGT
GGGTCGCGAGAAAGAGATCGAGCGTGTCATGCAGATCCTGTCGAGGAGAACTAAGAACAACCCCGCGTTGATAGGTGAGC
CTGGGGTTGGTAAGACAGCCATAGTAGAGGGGCTGGCTCAGCGAATAGTCAATTGCGATGTGCCGGACACCTTGCTCAAC
AAGAGAGTGCTCTCATTAGATATGGGAGCTCTTGTGGCAGGGACTAAATACAGGGGCGAATTCGAGGAGCGCCTCAAGAA
GATTATGGCTGAAATCAAGGAGTCTGGAGCTATCCTGTTCATAGATGAGCTCCATACACTAGTGGGAGCTGGTGCTGCTG
AAGGTGCTGTAGATGCAGCCAATATCCTCAAGCCAGCACTTTCCAGGGGTGAGATCCAGGTTATAGGTGCTACCACTCTG
GATGAATATCGCAAGTATATAGAGAGAGATGCTGCGCTTGAGAGGCGATTCCAACCCGTCATGGTCGAAGAGCCAACTGT
TGAGGAGACTATCGAGATCCTCAAGGGTGTAAGACCCAGATACGAGGCTCACCACAAGCTCAAGATTACCGATGAGGCTC
TGAAGGCTGCTGCTTATCTTGCTGCCCGATATGTATCCGATAGGTTCTTGCCAGATAAGGCTATAGACCTGGTAGATGAG
GCTGCCAGCCGAGTAAGGATGCACAGGGCTGCAAGTCCTCCAAGCCTGAAGGATGCTCTCAGACATCTGAAGGCGATACA
GGACGAGAAGGAAGCCGCTATCAATGCTCAGAACTATGAGATGGCTGCTGCTTTCCGTGACCGCGAAGAGAGACTTCAGG
AAAGAATAGGCATGCTTGAGCAGCAGTGGCAGGAAGAACAACAAGCTGAGGAGCCTTATGTAACCGAAGAGGATATAAGC
CAGGTAGTGAGCATGTGGACTGGCATTCCTCTAACTAGGATAGCTGGTGAAGAGTCGGAGCGGCTCCTGAAGATGGAGGA
AGAGCTCCACAAGCGCATCGTGGGCCAGGATGAGGCTATCACTACTGTGGCTCGGGCCGTGCGTCGAGCCAGGACAGGTA
TGAAAGACCCAAGGCGGCCAGTAGGTTCTTTCATATTCCTTGGCCCTACTGGAGTTGGTAAGACTGAGCTCGCTAAGACG
CTTGCCGAGTTCATGTTTGGTAGCGAAGACGCTCTTATCAAGATTGATATGTCAGAGTTCATGGAGCGGCATGCGGTAGC
GAGATTGGTTGGAGCTCCTCCAGGATACGTTGGATATGAAGAGGGTGGCCAGCTGACAGAGGCTGTCCGCAGGAAGAGCT
TCTCTGTCATACTTCTAGATGAAATAGAGAAGGCTCACCCAGAGGCATTCAATATGCTGCTCCAGATACTGGAGGATGGT
CACCTTACGGATGCCAAGGGTAGGAGGGTAAACTTCCGTAACACAATCATAATCATGACCAGCAACATCGGTGCGGAGAT
GATCAACCGAGATACGACAGTAGGCTTTACGATCCGTACCGATGAGGCTAAGGCCCAACAGAGGGCTTATGAGAACATGA
GGGACAAGGTTCTGAGTGAGCTGAAGAAGCACTTCAGGCCCGAGTTCCTGAATAGAATCGATGCTGTGGTAGTGTTCCAC
TCGTTGTCGCCTGAGCATATACGCAAGATAGTAGACATACAGATTGATCGCGTGAGGGAACGCCTGGCTGAACAGCAGAT
TCAGCTGAAGCTGACCGAGGAAGCTCTAAACACGCTGGCCAGAAGAGGCTACGACCAAACTTATGGTGCTCGACCACTGA
GGAGGTTGATACAGACAGAGGTTGAAGACAAACTGGCTGAGGGTGTCCTTGAGGGTAAGTTCCAGCCAGGATCTACAGTA
GTGGTTGATGCTCACGACGACGAGATAGTGCTGCATCTTGAAGAGGAGCTTGTAACCGCATAG

Protein sequence :
MSDRGERFDRFTERARKVLSLAHEEAARFNHNYIGTEHILLGLVREGDGVAARVLASMGVQLQKVRAAVEFIIGRGERPP
QGEIGLTPRARRVIELAFDEAKRQNHHYIGTEHLLLGLVREGEGIAAGVLESLGVNLEKVRAQVLQVINQSSAYSQQGKA
ATKTPYIDALGTDLTELARNDKLDPIVGREKEIERVMQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIVNCDVPDTLLN
KRVLSLDMGALVAGTKYRGEFEERLKKIMAEIKESGAILFIDELHTLVGAGAAEGAVDAANILKPALSRGEIQVIGATTL
DEYRKYIERDAALERRFQPVMVEEPTVEETIEILKGVRPRYEAHHKLKITDEALKAAAYLAARYVSDRFLPDKAIDLVDE
AASRVRMHRAASPPSLKDALRHLKAIQDEKEAAINAQNYEMAAAFRDREERLQERIGMLEQQWQEEQQAEEPYVTEEDIS
QVVSMWTGIPLTRIAGEESERLLKMEEELHKRIVGQDEAITTVARAVRRARTGMKDPRRPVGSFIFLGPTGVGKTELAKT
LAEFMFGSEDALIKIDMSEFMERHAVARLVGAPPGYVGYEEGGQLTEAVRRKSFSVILLDEIEKAHPEAFNMLLQILEDG
HLTDAKGRRVNFRNTIIIMTSNIGAEMINRDTTVGFTIRTDEAKAQQRAYENMRDKVLSELKKHFRPEFLNRIDAVVVFH
SLSPEHIRKIVDIQIDRVRERLAEQQIQLKLTEEALNTLARRGYDQTYGARPLRRLIQTEVEDKLAEGVLEGKFQPGSTV
VVDAHDDEIVLHLEEELVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tter_1349 YP_003323078.1 ATPase AAA-2 domain protein VFG0079 Protein 0.0 59
Tter_1349 YP_003323078.1 ATPase AAA-2 domain protein VFG0080 Protein 2e-131 48