|
Name : Tter_0979 (Tter_0979) Accession : YP_003322718.1 Strain : Genome accession: NC_013525 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1045596 - 1046867 bp Length : 1272 bp Strand : + Note : KEGG: gsu:GSU0037 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : TTGGTGCTGGATCTTAGACTTATAAGAGAGCATCCGGATATAGTCAAGGCGGGTCTCAAGCGTAGAGGCTCAGATGCTCC TATCGATGAGGTGATTGCTCTTGACTCCAGAAGGAGGAAAATACTTACAGAGGTTGAGGGACTTAGATCCGAACGCAACA AGGTATCGAAGCAAATCCCTAGGATAAGTGATAAGACCGAGAGAGAATCTCTTATATCTCGGATGCGTCAGGTAGGAAAT CAAATTGAGTCTCTGGAAAGTGAGCTGCGTGAGGTCGAGTCCAAGCTACATACATTGTTACTACAGATACCCAACATTCC CGATCCTGAAGTCCCCGACGGTAAGGATGAAAGCGATAACGTAGTCGTACGTCAGCACGGGGAGCCTAGGGAGCTACCAT TTGATGCTAGGCCTCATTGGGAGATAGGCGAGAGGCTTGGGATCATAGATTTTGCTCAGGGGCAGAAGATCAGTGGATCA CGTTTCTATGTACTTCATGGAGACGGAGCCAGGTTACAAAGGGCTCTCATAACTTGGATGTTGGATCTGCGTAGGCAAGA GGGATACAAGGAGGTTTATCCTCCCGCAATAGTAAAAGAAGAGACTTTATGGGCATCGGCTCACTTACCTGATTTCGAGG ATACGATGTATCATGACGTCGAAGACGACGTGTGGTTTATTCCTACTGCAGAAGCTCCTCTGACCGGGATCCACATGAAC GAGATAATACCGGTAGAGTCTCTCCCCATTAGGTATGCTGCTTACACACCCTGCTTCAGAAGGGAGAAGATGAGCGCAGG CAAGGACGTGAGGGGTATCAAGAGAGGGCACCAGTTTGACAAGGTGGAGATGTACCACTATACCCTCCCTGAGGACTCTC CAAAACACTTGGAAGAGCTTGTGAAGCATGCCGAGGATACTGCCATCAAGCTCGGGCTTACCTGTAGGGTCGTAGAGCTC TGTACTGGAGACCTAGGATTTAAGTCGCGCAGGACTTTTGATATAGAGGTTTGGTCACCTGGTGTAAGGGAGTGGCTTGA GGTTAGCTCTTGCTCCAATGTAGGGGATTTTCAGGCTAGAAGGGCGGGTATTCGCTTCAAGAGGACTCCTAAGTCTGAGA CAGAATACGTGCATACACTGAATGGGTCTGGGCTAGCACTTCCAAGAGTGATGATCGCCATTCTCGAGAACTATCAGCAG CCGGATGGATCAGTGGTTATACCTGAAGTTCTAAGGCCATACATGGGAGGACAAGAGGTCATTAAGAGCTGA Protein sequence : MVLDLRLIREHPDIVKAGLKRRGSDAPIDEVIALDSRRRKILTEVEGLRSERNKVSKQIPRISDKTERESLISRMRQVGN QIESLESELREVESKLHTLLLQIPNIPDPEVPDGKDESDNVVVRQHGEPRELPFDARPHWEIGERLGIIDFAQGQKISGS RFYVLHGDGARLQRALITWMLDLRRQEGYKEVYPPAIVKEETLWASAHLPDFEDTMYHDVEDDVWFIPTAEAPLTGIHMN EIIPVESLPIRYAAYTPCFRREKMSAGKDVRGIKRGHQFDKVEMYHYTLPEDSPKHLEELVKHAEDTAIKLGLTCRVVEL CTGDLGFKSRRTFDIEVWSPGVREWLEVSSCSNVGDFQARRAGIRFKRTPKSETEYVHTLNGSGLALPRVMIAILENYQQ PDGSVVIPEVLRPYMGGQEVIKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-84 | 46 |
