Gene Information

Name : Sthe_3155 (Sthe_3155)
Accession : YP_003321377.1
Strain :
Genome accession: NC_013524
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 818880 - 819674 bp
Length : 795 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tcx:Tcr_2148 ABC transporter related

DNA sequence : 
ATGCTCGCAACCACCACCGCCACCGCGCACCCGATCACCGTCCGCGACCTGACCGTCGCCTACCAGGACCGCGCCGTCCT
CTGGGATGTGGACCTCGATGTCCCTGGCGGCGTGCTGATGGCGATCGTCGGACCGAACGGCGCCGGCAAGACGACGCTGA
TCAAGGCCATCCTCGGGCTGGTGCCGGTCGTCGCCGGGCAGGTGCGCATCGAGGGCAAGCCGCTGGCGGAGGTGCGCCGC
CGGGTCGCCTACGTGCCCCAACGCGGCAGCGTCGACTGGGACTTCCCGACCAGCGTTCTCGACGTCGTGATGATGGGCCG
CTACGGCGCGCTCGGCTGGATCCGCCGCCCGGGCCAGCGAGAGCGGCAGGCCGCGCTCGACGCCCTGGAGCAGGTGGGCA
TGCGCGACTTCGCCGGCCGGCAGATCAGCCAGCTCTCCGGCGGCCAGCAGCAGCGCGTCTTCCTGGCCCGCGCCCTGGTG
CAGGACGCCGCCATCTACCTGATGGACGAGCCCTTCCAGGGCGTCGACGCCACTACCGAGCGGACCATCGTCGGGCTGCT
GCGCGACCTGCGCTCGGCCGGCAAGACGGTCGTCGTCGTGCACCACGACCTCCAGACCGTGCCCGAGTACTTCGACTGGG
TGACGCTGCTCAACGTGCGCAAGATCGCCAGCGGTCCGGTCGAGGAGGTCTTCACCCCCGAGCTGCTGCGGCGCACCTAC
GGCGGCCACATCGCCTTCCTGGGCCAGCCCGGCCAGGACGGCACCGTCGCGGCCGTGGCAGGCGGGGAGGAGTAG

Protein sequence : 
MLATTTATAHPITVRDLTVAYQDRAVLWDVDLDVPGGVLMAIVGPNGAGKTTLIKAILGLVPVVAGQVRIEGKPLAEVRR
RVAYVPQRGSVDWDFPTSVLDVVMMGRYGALGWIRRPGQRERQAALDALEQVGMRDFAGRQISQLSGGQQQRVFLARALV
QDAAIYLMDEPFQGVDATTERTIVGLLRDLRSAGKTVVVVHHDLQTVPEYFDWVTLLNVRKIASGPVEEVFTPELLRRTY
GGHIAFLGQPGQDGTVAAVAGGEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-48 44
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-48 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-52 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-52 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-53 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 9e-53 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-53 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_3155 YP_003321377.1 ABC transporter BAC0400 Protein 9e-79 65
Sthe_3155 YP_003321377.1 ABC transporter BAC0350 Protein 4e-53 43
Sthe_3155 YP_003321377.1 ABC transporter BAC0440 Protein 2e-50 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_3155 YP_003321377.1 ABC transporter VFG0526 Protein 4e-53 43