Gene Information

Name : Sthe_2976 (Sthe_2976)
Accession : YP_003321201.1
Strain :
Genome accession: NC_013524
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 613766 - 614593 bp
Length : 828 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gem:GM21_3726 ABC transporter related

DNA sequence : 
TTGAAGGGGCAGCCGGTGCAATCGACCATCGCCAACGGCGTGGCGGAGCCGGCCACGTCCGCCCCGATCGTTGTACGGAA
CCTGACGACGGGCTACCGTGAGAACCCCGTGCTGCAGGATGTCACGCTCACGGTCGAGCGCGGCTCGTTGGTGGGTGTCA
TCGGCCCGAACGGTGGCGGCAAGTCGACCCTGTTCAAGGCGATCCTGGGGCTGCTCCGGCCATGGTCCGGCACCGTCTTG
ATCGAGGGGTCGCCGCGCCGGCCCGGCCCGCGCATCGCCTACGTGCCGCAGGCCGAGACAGTCGATTGGTCCTTCCCGGT
CACGGTCCACGACGTGGTCTTGATGGGCCGCACGCCGCGGCTCGGGTTCCTCCGGCGGCCACGCGCGCGCGACCACGAGA
TCGCGACCGAGGCCCTCGAAGCGGTCGGGATGCAGGAGTACCGCGACCGGCAGATCGGCGAGCTGTCGGGCGGGCAGCGT
CAACGCGTCTTCCTCGCCCGCGCCCTGGCGCAGGAGCCGAGCATCCTCCTCCTGGACGAGCCGGTCAGCGGCGTGGACGC
CGTTACTCAGCACCAGATCTTCGAGCTGCTGGAGCGGCTGTGCCAGCGCGGGATTACCGCGATGGTCGCCTCGCACGACC
TGAGCTGTGTGGCCCAGCGCTTCGATCAGGTGCTCCTCCTCAACCAGCGCGTCGTCGCCTACGGACCGCCCGAGGAGGTT
CTGACCCAGGAGTTGTTGAACGAGACGTTCCGCTCGCACCTGCTCCTCCTGCGGGTGGGCGAGCGGACCTTCGTGGTGGA
GGACCCCGACCATCATGGGACTGCTTGA

Protein sequence : 
MKGQPVQSTIANGVAEPATSAPIVVRNLTTGYRENPVLQDVTLTVERGSLVGVIGPNGGGKSTLFKAILGLLRPWSGTVL
IEGSPRRPGPRIAYVPQAETVDWSFPVTVHDVVLMGRTPRLGFLRRPRARDHEIATEALEAVGMQEYRDRQIGELSGGQR
QRVFLARALAQEPSILLLDEPVSGVDAVTQHQIFELLERLCQRGITAMVASHDLSCVAQRFDQVLLLNQRVVAYGPPEEV
LTQELLNETFRSHLLLLRVGERTFVVEDPDHHGTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 9e-46 45
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 9e-46 45
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-46 45
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-46 45
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-46 45
adcC YP_006309084.1 ABC transporter, Zn porter Not tested FWisland_5 Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_2976 YP_003321201.1 ABC transporter BAC0400 Protein 6e-47 50
Sthe_2976 YP_003321201.1 ABC transporter BAC0440 Protein 5e-47 47
Sthe_2976 YP_003321201.1 ABC transporter BAC0350 Protein 2e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_2976 YP_003321201.1 ABC transporter VFG0526 Protein 2e-46 45