Gene Information

Name : Sthe_3460 (Sthe_3460)
Accession : YP_003321681.1
Strain :
Genome accession: NC_013524
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1178196 - 1178903 bp
Length : 708 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: glo:Glov_0231 ABC transporter related

DNA sequence : 
ATGACCACCTTGTTGCTGGACAACGTCACCAAGATCTACGGGCAAGGGGAGTACGCCGTCACCGCCCTGGATGGCGTCTC
GCTCAGCGTCTCCGCCGGGGAGCTGGTGGCGGTCGTGGGGCCGTCCGGCTCGGGCAAGACGACGCTCCTGGCGATCGCCG
GCGCGCTACTGCAACCGACACGAGGCCGGGTTGTGCTCAAAGGGCAGGAACTCACCGGCCTCAACGCAGCCGCGCTCGCC
CGCATCCGGTTGGAGCACATCGGCTTCGTGCTCCAGACATCGAACCTCGTCCCCTACCTCACGGCACGCGATCAGTTGCT
GCTGGTCGCGCGCCTGGCCGGGCGGATCGACGCGGCTGCGCGAACGCGCGCCGACGATCTCCTGCGGGAACTCGGGCTGG
GTCACCGCCTCGATCACTACCCGGAAGCCCTCTCCGGCGGCGAACGCCAGCGGGTGGCAATCGCCCGCGCGCTGATGAAC
GACCCCGACATCCTGCTGGCCGACGAGCCGACTTCGAGTCTCGACTCCGTTCGCGGGCGCGAGGTCGTGGAGATGCTCGC
CCGGGAGGTGAAGGAGCGGAACAAGGCCGCGGTGATGGTCACCCACGACGAGCGCATGCTCGACCTGGTGGACCGCGTCA
TCCGCATCGCCGACGGTCGGCTCTCCCACGCCAACGCGGCATCAGCGAGTCGCGCCGCGGCCGAGTGA

Protein sequence : 
MTTLLLDNVTKIYGQGEYAVTALDGVSLSVSAGELVAVVGPSGSGKTTLLAIAGALLQPTRGRVVLKGQELTGLNAAALA
RIRLEHIGFVLQTSNLVPYLTARDQLLLVARLAGRIDAAARTRADDLLRELGLGHRLDHYPEALSGGERQRVAIARALMN
DPDILLADEPTSSLDSVRGREVVEMLAREVKERNKAAVMVTHDERMLDLVDRVIRIADGRLSHANAASASRAAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 42
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_3460 YP_003321681.1 ABC transporter NC_008702.1.4606598. Protein 4e-28 44
Sthe_3460 YP_003321681.1 ABC transporter CP001581.1.gene598.p Protein 1e-35 42
Sthe_3460 YP_003321681.1 ABC transporter NC_012469.1.7686878. Protein 3e-30 42