Gene Information

Name : Sthe_0964 (Sthe_0964)
Accession : YP_003319222.1
Strain :
Genome accession: NC_013523
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1064746 - 1065480 bp
Length : 735 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0822 ABC transporter related

DNA sequence :
ATGACGGGGCCTATCATTCACCTGACCGGCGTGACCAAGGAGTATCAGGCGGGACGGCGCGCTATCCAGGCACTGCGCGG
CGTAGACCTGATCGTCGAGCCCGGGGAGTGGGTCACCATCCTCGGCCCGTCCGGGTGCGGCAAGTCCACGCTGCTCAACA
TCCTCTCCGGGATCGACCGCGCCACCGGCGGGTCCGTCGAGGTCGCCGGCGTGGATCTCCGTAGCCTCAGCGAGGAGGAG
CTGGCGCGCTGGCGGGGACAGCACGTCGGGATCATCTTCCAGTTCTTTCAGCTCATGCCGACCCTGACCGCCCTCGAGAA
TGTGCTGCTGCCCATGGAACTGGTCGGCAACCGGCCACGGCGCGACCGCGCCCGCGAGTTGCTGGAACGCGTCGGCGTGG
AGCACCTCGCCGACCACCTCCCCAACGAACTCTCGGGCGGCGAACAGCAGCGGGTTGCAATCGCCCGCGCGCTCGCCAAC
GATCCACCACTGCTGCTGGCCGACGAGCCGACCGGCAACCTCGACAGTGCCTCGGGCGCGCGGGTGCTCGCCTTGCTGGC
CGAAATGTGGGAGACGGGGAAGACGCTGGTGCTCGTCACCCACGACCGCGCCATCGCCTCCCACGGCTCGCGCGTGATCG
AGATGCGGGATGGTCGCATCGTGGCCGACCGCCGCGTTGCCGAGGACGTGCCCCACGCGGCAACGCCCGATATCGCGGCC
AGTGGAGAAGCGTAG

Protein sequence :
MTGPIIHLTGVTKEYQAGRRAIQALRGVDLIVEPGEWVTILGPSGCGKSTLLNILSGIDRATGGSVEVAGVDLRSLSEEE
LARWRGQHVGIIFQFFQLMPTLTALENVLLPMELVGNRPRRDRARELLERVGVEHLADHLPNELSGGEQQRVAIARALAN
DPPLLLADEPTGNLDSASGARVLALLAEMWETGKTLVLVTHDRAIASHGSRVIEMRDGRIVADRRVAEDVPHAATPDIAA
SGEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_0964 YP_003319222.1 ABC transporter NC_008702.1.4606598. Protein 6e-32 45
Sthe_0964 YP_003319222.1 ABC transporter NC_012469.1.7686878. Protein 4e-40 44
Sthe_0964 YP_003319222.1 ABC transporter NC_012469.1.7685735. Protein 6e-32 44
Sthe_0964 YP_003319222.1 ABC transporter CP001581.1.gene598.p Protein 1e-33 41
Sthe_0964 YP_003319222.1 ABC transporter CP001581.1.gene798.p Protein 5e-34 41