Gene Information

Name : Sthe_0669 (Sthe_0669)
Accession : YP_003318928.1
Strain :
Genome accession: NC_013523
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 739538 - 742153 bp
Length : 2616 bp
Strand : +
Note : KEGG: hau:Haur_4078 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; SMART: DNA mismatch repair pro

DNA sequence :
ATGTCCACGCCGATTCGGCGGCAGTACCTCTCGATCAAACGCCAGTACCCGGACACGATCGTCTTTTTCCGGCTGGGCGA
CTTCTACGAGACCTTCGACGACGACGCGAAACTGGCCGCCTCCGTGCTGGACATCACCCTCACGTCCCGCGAGATGGGGC
GGGGCAATCGTATCCCCATGGCGGGCATTCCGTGCCACGCGGCGCAGGGGTACATCGCCCGTCTGGTCGGGGCCGGTCAC
AAGGTCGCGATCTGCGAGCAGATCGGGGAGCCGACGGGTCGGGAGCTGGTCGAGCGGCGCGTCACGCGGATCGTCACACC
GGGCACGGTGACCGACCCGGCGATGCTCGACAGCGACACCAATCACTACATCGCGGCGGTCCTGCTCGACGGCGCGCGGG
CGGGCCTGGCCGTGGCCGACATCTCCACCGGTGAGTTCGCCACGACCGAGATCAACGCGGCGGACCCAGCCGCGGCCCGC
GCCGCGGTGCATCGCGAACTGCTGCGGCTCCACCCGGCCGAGATCGTCGCTCCTGCCAGCCCGCCGGACGCGGAGGACCC
ACTGCCGGCCGAGGTCGTTCCTGAAGGTGCTTACATCACCCGGCGGGACCGATCCGAGTGGCGCCTGGAGGTAGCCGATG
AGGAGCTGCGGCGCCACTTCGGGGTCGAGACGCTGGAGGCCTATGGCTGCGCAGGCAAGCCGTTCGCCATCCGGGCCGCC
GGGGCGCTGCTGCAGTACCTGGCGGAGACGCAGGTCGGCAGCCTCAAGCAGATCGTCGACCTCGTCACCTACAGCACCGA
GCGCTACATGTCGCTCGACGGGCAGACGCGGCGCAACCTGGAGTTGTCCGAGAGCAGCCGCGGCGAGCGGCGACACTCGC
TGATCGCCGTGCTCGACCAGACCCGGACCCCGATGGGCGCGCGGATGCTGCGGCGCTGGGTCGGCCAGCCGCTGCTGGAC
CTCGCCGAGCTCCAGGACCGCCAGGACGCGGTGGCCTACTTCGTCGATCGGGCGCTGGTGCGGGCGCGGCTCCGTGACGC
GTTGGGACACGTTTCCGACCTGGAGCGGCTGATCAATCGGGTGGTGACCGGCGCAGCCGGCCCGCGGGAGTTGCTGTCGC
TGGCCCGCTCGCTCCAGCGGTTGCCCGAGATCAACGAGATCCTGGGCGACGGGGACCGGCCGTGCCTCGTGGCCGGCCCG
CCCGACTGCTCGGAGACGGCTCGTCTGATCGTACAGGCGCTGGTTGACGAGCCGCCGGCCGTCCTCGGGGGCGGGCCGAC
AATCCGCGCCGGGTTCAGCCCCGAGCTCGACGGCCTGCGCGCTTCTTCCCGTGAGGCGCGGGAGTGGATCGCCGGGCTGG
AGCAGGCCGAGCGGGAGCGGACCGGGATCAAGTCGCTCAAGGTCGGCTTCAACAAGGTCTTCGGCTACTACATTGAGGTG
AGCCGCGCGAACATCAGCGCGGTGCCCTCCGACTACCAGCGCAAGCAAACGCTGGTGAACGCCGAGCGCTACATAACCCC
GGAGCTCAAGGAGTACGAGAGCCGGGTCCTGAACGCCGAGGAGCGCATCGCCGACCTGGAGGAGCAGGTGTACCGCCGCG
TGCTGGCTCAGGTGGCGGCGGCGGCTGACTCCGTGCGGGCGGCGGCGCAGGCGGTAGCGCAGCTCGATGTGTTGTCGGCG
CTCGCAGAGGTAGCGGTGCGGCGGCGCTATGTCCGGCCGGAGCTGGACGACAGCACGGTGCTCGAGATCGTGGGCGGGCG
ACACCCGGTCGTCGAGGTCACGTTGGAGACAGGCCAGTTCGTGCCCAACGACACGTACCTCGACACCGAATCCAACCAGA
TCACGATCCTGACCGGCCCGAACATGGCCGGGAAGAGCACCTACCTGCGACAGGTCGCGCTAATCGTGCTCCTGGCCCAG
ATCGGCTCGTTCGTCCCCGCCGAGCGGGCGCGGATCGGTCTGGTCGATCGGATCTTCACCCGGATTGGCGCCCAGGACGA
CATCGCCACCGGGCAGAGCACCTTCATGGTGGAGATGGTCGAGACCGCGACGATCCTGCACCACGCCACGCCGCGCTCGC
TGGTGGTGCTGGACGAGATCGGGCGCGGGACCAGCACCTACGACGGCCTTGCGATCGCGCGTGCCGTCGTCGAACACCTC
CACAACAGCCCGCGCCTGGGCTGTAAGACGCTCTTCGCCACGCACTACCACGAGCTGACCGAACTCGAGAAGATCCTGCC
GCGGGTCCGCAACTATCGGGTCGATGTGCTGGAGGAGGGAGACGAGGTCGTCTTCCTGCACCGGGTTGTCCCCGGTGGCG
CCGATCGCAGCTACGGCATCCACGTGGCGCAACTCGCCGGGATGCCGCGCGCGGTGGTGCGCCGCGCCGGGGAGATCCTG
GCCGACCTGGAGGGGAGTGCCGAGCGCACCGAACGCGGGCGCCGCCGCAAGGCGATGGCGACACCCCGCGTGGAAGCGAT
GCAGTTGACCCTCTTCGGTGTGCCGGACCCGATCGTCGAGGACCTTAAGGCGCTTGACGTGGAGTCGCTGACGCCACTCG
AAGCCCTGACCACGCTCTACGAGCTGCGCCGCCGCGCGCTCGACGGGACGGGGTGA

Protein sequence :
MSTPIRRQYLSIKRQYPDTIVFFRLGDFYETFDDDAKLAASVLDITLTSREMGRGNRIPMAGIPCHAAQGYIARLVGAGH
KVAICEQIGEPTGRELVERRVTRIVTPGTVTDPAMLDSDTNHYIAAVLLDGARAGLAVADISTGEFATTEINAADPAAAR
AAVHRELLRLHPAEIVAPASPPDAEDPLPAEVVPEGAYITRRDRSEWRLEVADEELRRHFGVETLEAYGCAGKPFAIRAA
GALLQYLAETQVGSLKQIVDLVTYSTERYMSLDGQTRRNLELSESSRGERRHSLIAVLDQTRTPMGARMLRRWVGQPLLD
LAELQDRQDAVAYFVDRALVRARLRDALGHVSDLERLINRVVTGAAGPRELLSLARSLQRLPEINEILGDGDRPCLVAGP
PDCSETARLIVQALVDEPPAVLGGGPTIRAGFSPELDGLRASSREAREWIAGLEQAERERTGIKSLKVGFNKVFGYYIEV
SRANISAVPSDYQRKQTLVNAERYITPELKEYESRVLNAEERIADLEEQVYRRVLAQVAAAADSVRAAAQAVAQLDVLSA
LAEVAVRRRYVRPELDDSTVLEIVGGRHPVVEVTLETGQFVPNDTYLDTESNQITILTGPNMAGKSTYLRQVALIVLLAQ
IGSFVPAERARIGLVDRIFTRIGAQDDIATGQSTFMVEMVETATILHHATPRSLVVLDEIGRGTSTYDGLAIARAVVEHL
HNSPRLGCKTLFATHYHELTELEKILPRVRNYRVDVLEEGDEVVFLHRVVPGGADRSYGIHVAQLAGMPRAVVRRAGEIL
ADLEGSAERTERGRRRKAMATPRVEAMQLTLFGVPDPIVEDLKALDVESLTPLEALTTLYELRRRALDGTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 6e-132 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_0669 YP_003318928.1 DNA mismatch repair protein MutS VFG0562 Protein 3e-141 43