Gene Information

Name : Sthe_0496 (Sthe_0496)
Accession : YP_003318756.1
Strain :
Genome accession: NC_013523
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 556184 - 558637 bp
Length : 2454 bp
Strand : +
Note : PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: deb:DehaBAV1_0051 ATPase

DNA sequence :
ATGCCTGACAAGTTCGACAAGTTCACCGAGCGAGCGCGCAAGGTGCTGACGTTGGCGCAGGAGGAGGCGCATCGCTTCAA
TCACAACTACATTGGCACCGAGCATCTGCTCCTCGGTCTGGTGCGTGAAGGCGACGGTGTGGCGGCCCGCGTGCTGAGCA
ACATGGGCGTGCAGTTGCCCAAGGTGCGCAGCGCGGTCGAGTTCATCATCGGGCGGGGCGACTCGATGATCGTGGGCGAG
ATCGGCTTGACGCCGCGCGCCAAGAAGGTCATCGAGTTGGCTGTCGATGAAGCCCGCCGGCTCAACCATCACTACATCGG
CACCGAGCACCTGCTGCTCGGCCTCGTCCGCGAGCGCGAGGGCATCGCCGCGGGCGTCCTGGAGAGCCTGGGCGTCAACC
TGGAGAAGGTGCGCCAGCAGGTCCTGCAGGTCGTCAGCCAGAGCAGCGGTTATCAGCAGAAGGCACAGGCGACGAAGACA
CCATACATGGACGCGCTCGGCTTCGATCTGACCGAGGCCGCGCGTCAGGGGAAGCTGGACCCGGTGATCGGCCGCCAGGC
TGAGATCGAGCGGGTCATGCAGATTCTTTCCCGGCGGACCAAGAACAACCCCGCTCTGATCGGCGAGCCGGGCGTCGGTA
AGACGGCCATCGTCGAGGGGTTGGCCCAGCGAATCGTCTCGGGCGATGTGCCCGAGCCGCTGCAGAACAAGCGCCTGGTG
GCGCTGGACATCGGCGCGCTGGTCGCCGGGACGAAGTACCGTGGTGAGTTCGAGGAGCGCCTGAAGAAGATCGTGTCCGA
GGTCAAGGAGACCGGTGCGATCCTCTTCATCGACGAGCTACACACGCTCGTGGGCGCCGGGGCCGCCGAGGGGGCGGTGG
ACGCCGCCAACATCCTGAAGCCGGCCCTGTCGCGCGGCGAGTTGCAGACGATCGGCGCGACGACGCTCGACGAGTACCGC
AAGTACATCGAGCGGGACGCCGCGCTCGAGCGCCGGTTCCAGCCGGTGCAGGTCGAGGAGCCGACCGTCGAGGAGACGAT
CGAGATCCTGCGCGGCATCCGCGAGCGGTACGAAGAGCACCACAAGCTCAAGATCACTGACGAGGCGCTGCGCTCGGCCG
CGGTGCTGGCCTCGCGCTACGTCCCCGACCGCTTCCTGCCGGACAAGGCGATCGACCTGGTCGATGAAGCCGCGTCCCGG
GTGCGGATGTACCGCTCGGCATCGCCGCCGAGCCTGAAGGAGGCGAAGCGCGGGCTGGAGTCGCTCCGGCGGGAGCTGGA
CGCGGCCGTGAGCGGCCAGGAGTTCGAGTTGGCGGCCGACCTGCGCGACCGGGAGCGGAAGCTGCAGGGCCGGATCGCCG
ACCTCGAAATGCACTGGAAGGAAGAGCAGGAGAACGACGAGCCGCAGGTGACCGAGGAGGACATCGCCCAGGTCGTCTCG
ATGTGGACCGGCATCCCGCTGATGCGGCTGGCCACCGAGGAGACCGAGCGGCTGCTCCACATGGAGGAGGCGCTGCACGA
GCGTATCGTCGGCCAGGAAGAGGCGATCTCGACCATGGCCAAGGCGGTGCGGCGGGCGCGAGCGGGCCTGAAGGACCCGC
GGCGACCGATCGGGAGCTTCATCTTCCTCGGCCCGACGGGCGTCGGGAAGACGCTGCTCGCCCGGGCGCTGGCGGAGTTC
ATGTTCGGCAGCGAGGACGCGCTGATCAAGATCGACATGAGCGAGTTCATGGAGCGGCACAACGTGTCGCGTCTGGTCGG
CGCGCCGCCGGGCTACATCGGCTACGAAGAGGGCGGGCAGTTGACCGAGGCGGTCCGCCGCAAGAGCTACTCGGTGATCC
TGCTCGACGAGATCGAGAAGGCGCACCCCGAGGCGTTCAACATGCTCCTCCAGATCCTGGAGGACGGTAACCTGACCGAC
GCCAAGGGACGGCGGGTCGACTTCCGCAACACGATCATCATCATGACGTCGAACATCGGCGCCGAGATGATCCAGCGGGA
AGGCACGCTCGGCTTTGCGGTGGCGTCGAACCCGGAGGAGCGCTTCCAGCAGGAATATCAGGCCATGAAGGACAAGGTGC
TTGGGCAGCTCAAGCAGACCTTCCGGCCGGAGTTCCTGAACCGGATCGACGGGGTGATCGTGTTCCACCCGCTGACGCCG
GAGCAGATCCATCAGATCGTGGAGCTGGAGCTGAAGCGCCTGCGCACGCAGCTTCAGGAGAAGGACATCAAGCTGGAGGT
CACCGAGGCGGCGATGCGGCTGCTGGGCGAGCGTGGCTACGACCGGCAGTTCGGCGCACGCCCGCTGCGGCGGATCATCC
AGAACCTGATCGAGGATCCGCTGGCCGAGGGCCTGCTCGAAAACCGCTTCCCGGAGGGCAGCACCGTCGTGGTGGACGTC
CGCGACGACCTGCTCGTCCTGGAGCGGGCGGACGAGTTGGTCTCGGTCTCCTAG

Protein sequence :
MPDKFDKFTERARKVLTLAQEEAHRFNHNYIGTEHLLLGLVREGDGVAARVLSNMGVQLPKVRSAVEFIIGRGDSMIVGE
IGLTPRAKKVIELAVDEARRLNHHYIGTEHLLLGLVREREGIAAGVLESLGVNLEKVRQQVLQVVSQSSGYQQKAQATKT
PYMDALGFDLTEAARQGKLDPVIGRQAEIERVMQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIVSGDVPEPLQNKRLV
ALDIGALVAGTKYRGEFEERLKKIVSEVKETGAILFIDELHTLVGAGAAEGAVDAANILKPALSRGELQTIGATTLDEYR
KYIERDAALERRFQPVQVEEPTVEETIEILRGIRERYEEHHKLKITDEALRSAAVLASRYVPDRFLPDKAIDLVDEAASR
VRMYRSASPPSLKEAKRGLESLRRELDAAVSGQEFELAADLRDRERKLQGRIADLEMHWKEEQENDEPQVTEEDIAQVVS
MWTGIPLMRLATEETERLLHMEEALHERIVGQEEAISTMAKAVRRARAGLKDPRRPIGSFIFLGPTGVGKTLLARALAEF
MFGSEDALIKIDMSEFMERHNVSRLVGAPPGYIGYEEGGQLTEAVRRKSYSVILLDEIEKAHPEAFNMLLQILEDGNLTD
AKGRRVDFRNTIIIMTSNIGAEMIQREGTLGFAVASNPEERFQQEYQAMKDKVLGQLKQTFRPEFLNRIDGVIVFHPLTP
EQIHQIVELELKRLRTQLQEKDIKLEVTEAAMRLLGERGYDRQFGARPLRRIIQNLIEDPLAEGLLENRFPEGSTVVVDV
RDDLLVLERADELVSVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_0496 YP_003318756.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 61
Sthe_0496 YP_003318756.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 6e-139 50