Gene Information

Name : Sthe_0260 (Sthe_0260)
Accession : YP_003318521.1
Strain :
Genome accession: NC_013523
Putative virulence/resistance : Resistance
Product : binding-protein-dependent transport system inner membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 293846 - 294745 bp
Length : 900 bp
Strand : -
Note : PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH2313 oligopeptide ABC transporter permease protein

DNA sequence : 
ATGCGTGATCAAGCGCTCGCTCGCAGCGACATTGGCGCTCCGGGCGTTTCGCCCCTCGCAGGGGCCCGGCTCGCACGCTT
TGTGCGCCGGTTCAGCCGGAATCGACTGGCGATGGTCGGCCTCGTCATCATCGCCATCTTCCTCATCATGGCCATATTCG
CCCCGTGGCTCGCGCCGTACGACCCGATCGCGCAGGATCTTCCAGCACAGCTCCAACCGCCTTCGGCAGCCCACTGGCTC
GGGACAGATGACTTCGGGCGAGACATCCTGTCTCGCATCATCGTGGGCAGCAGGGTGTCACTCCTCGTGGGAGTCCTTGC
CACGAGCATCGGCGCCACCTGTGGCACGTGCATCGGCCTGGCAGCGGGCTTCTACCGACGGCTTGACAACCTGCTCATGC
GGATCATGGATATCCTGCTCGCATTTCCCAGCGTCGTTCTGGCCATCGCCGTCATCGCCGTTCTGGGGCCGAGCCTGTTC
AACGTCATGATCGCGGTCGGGATCAACTCGATCCCGACGTATGCGCGGCTGGTGCGGTCGACGACGCTCTCGATCAAAGA
GAAGGAGTTCGTTGAGGCGACGCGCGCGCTGGGTAGTGGAGACTCCCGCATCCTGTTCCGGCACATTCTCCCGAACTGCT
TGAACCCGATCGTCGTCTACTCGACGCTCCAGCTCGGTACAGCGATCCTGTCTGCCTCGATCCTCTCCTTCCTGGGGCTT
GGGATTCAGCCGCCGGATCCTGAGTGGGGTCAGATGGTCAACGCGGGTCGCGGTTGGCTCCGCGATGCTCCCCACATCGC
AACCTTCCCCGGGCTCGCCATCTTCTTCGTCGTCATGGGATTCAACCTGCTCGGGGATGGGCTACGCGATGTGCTGGATC
CCCGCATGAGACGCGGCTAG

Protein sequence : 
MRDQALARSDIGAPGVSPLAGARLARFVRRFSRNRLAMVGLVIIAIFLIMAIFAPWLAPYDPIAQDLPAQLQPPSAAHWL
GTDDFGRDILSRIIVGSRVSLLVGVLATSIGATCGTCIGLAAGFYRRLDNLLMRIMDILLAFPSVVLAIAVIAVLGPSLF
NVMIAVGINSIPTYARLVRSTTLSIKEKEFVEATRALGSGDSRILFRHILPNCLNPIVVYSTLQLGTAILSASILSFLGL
GIQPPDPEWGQMVNAGRGWLRDAPHIATFPGLAIFFVVMGFNLLGDGLRDVLDPRMRRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 4e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_0260 YP_003318521.1 binding-protein-dependent transport system inner membrane protein BAC0272 Protein 9e-37 42