Gene Information

Name : Sthe_2023 (Sthe_2023)
Accession : YP_003320275.1
Strain :
Genome accession: NC_013523
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 2244625 - 2245812 bp
Length : 1188 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: hau:Haur_0506 cystathionine gamma-synthase

DNA sequence :
ATGCATATGGCGCAGGATGAGACGACCCTGCGGTTCGAGACCCTCGCCATCCACGCGGGGCAGGACCCGGACCCGGCGAC
CGGGGCGGTGATCGTGCCGATTTACCAGACCTCCACCTTTGCCCAGGAGGAGGTCGGCAAGCACAAAGGGTTCGAGTACG
GCCGCACCGACAATCCGACCCGCAGCGCGCTGCAGACGGCGCTGGCCGCGCTGGAGCAGGCCGATTGGGGACTGTGCTAC
GCCTCCGGCCTGGCGGCGACCCAGAACACCTGGTACCTGCTCAACCCCGGCGACCACTTGATCCTGTCCGACGACGCCTA
TGGCGGCACCTACCGCCTGGCGGCGCGGGTCGCCTCCCGCTACGGCATCACGTTCTCGATGGTCGATCTGACCGATCTGG
ACGCGGTGGCGGGCGCCATCCAGCCGAACACGCGCATGATCTGGGTCGAGACGCCGACCAACCCGTACCTCAAGATCGTC
GACATCGCCGGGATTCGGGAGGTCATCGGGGACCGGTCCATCTGGCTGGTGGTCGACAACACCTTCGCCTCGCCGTACCT
GCAGCAGCCGCTGACGCTGGGCGCCGACCTGGTGCTCCACAGCACCACCAAGTACCTGGGCGGGCACAGCGACGTGATCG
GCGGCGCGGTGCTGGGGAACGACCCCGAGATCTACGAAACGCTGAAGTTCCACCAGAACGCGGCGGGCGCGGTGCCCGGC
CCGTTCGACTGCTGGCTGGTGCTGCGCGGGATTAAGACGCTCTCGGTTCGCATGCGCGAGCACAGCGCGAACGGCATGGC
GATCGCCGCGATGCTGCGCGAGCACCCGGCGGTTGAGCAGGTCTTCTACCCCGGCCTGCCGGACCACCCGGGTCACCTGG
TGGCGCGGCGGCAGATGCCGCGTGGCTTCGGCGGCATGGTGTCGTTCACGGTGCAGGGCGGCTACGAGGCGGCGCGGACC
GTGGTCAGCCGCACGCGTCTCTTCACCCTGGCTGAGAGCCTGGGGGGTGTCGAATCGCTCATCGAGCACCCGGGTCAGAT
GACCCACGCCAGCCTGGCCGGCTCCGGCTTCGAGATCGCGCCGAACCTGATCCGGCTCTCGGTCGGGATCGAGCACGTGG
ATGACCTGATGGACGACCTGCGCGAGGCCCTGTCCGCGGTCGTCCCGGCCAGCGTGCCCGGGAACTAG

Protein sequence :
MHMAQDETTLRFETLAIHAGQDPDPATGAVIVPIYQTSTFAQEEVGKHKGFEYGRTDNPTRSALQTALAALEQADWGLCY
ASGLAATQNTWYLLNPGDHLILSDDAYGGTYRLAARVASRYGITFSMVDLTDLDAVAGAIQPNTRMIWVETPTNPYLKIV
DIAGIREVIGDRSIWLVVDNTFASPYLQQPLTLGADLVLHSTTKYLGGHSDVIGGAVLGNDPEIYETLKFHQNAAGAVPG
PFDCWLVLRGIKTLSVRMREHSANGMAIAAMLREHPAVEQVFYPGLPDHPGHLVARRQMPRGFGGMVSFTVQGGYEAART
VVSRTRLFTLAESLGGVESLIEHPGQMTHASLAGSGFEIAPNLIRLSVGIEHVDDLMDDLREALSAVVPASVPGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-76 47
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-75 46
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-58 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_2023 YP_003320275.1 cystathionine gamma-synthase BAC0207 Protein 5e-64 42