Gene Information

Name : Sthe_1775 (Sthe_1775)
Accession : YP_003320031.1
Strain :
Genome accession: NC_013523
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1955233 - 1955973 bp
Length : 741 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0705 ABC transporter, ATP-binding protein

DNA sequence : 
ATGGTTCCGGCTATTCGGGAAGAACGCCTAACTGTCACCACGGAGCGGGACACCGATCTCATCATCACCGCAAAGGGCGT
CGAGAAGACCTACGACACCGGCAAGCTCCGGGTTCCGGCACTGCGGGGTGTCGATCTCACGGTGCGCCGCGGCGAGATGG
TGGCCATCATGGGGCCGTCGGGATGCGGCAAGACCACGCTCCTCAACTGCCTGTCAGGACTCGACACCATCGACAGCGGC
ACGATTCTGATCGCAGGCACGGACCTCTCCAAGCTGTCCGATAACGCGCGAACCGAGTTCCGGGCCCGGCAGATGGGTTT
TGTCTTCCAGTTCTACAATCTCCTGCCCGTGCTCAGCGCCGTGGAAAACGTGGAGCTACCGCTGCTCGTCAGCGGCGTGC
GTCCGAAGGACGCGCGAAAACGCGCCCTTGAGGTGCTGGAGCAGGTGGGGCTGGCCCAGTGGGCCAACCACAGACCGGCC
GAGCTATCCGGCGGCCAGCGGCAGCGCGTGACAATCGCACGCGCCCTGGCGAACCAGCCGGCGATCGTCTGGGCCGACGA
GCCAACCGGCGACCTGGACAGCCAGACCGCGGACGAGGTCATGGCCCTGATGCGCCACCTGAATCAGACGAACCAGCAGA
CCTTCGTGGTCGTCACCCATGACCCGCGCATCGGTGCCATGTGCGACCGGATCATCCGGATGCAGGACGGCCGAATCGTC
AGCGACGACCTCGTCGAGTAG

Protein sequence : 
MVPAIREERLTVTTERDTDLIITAKGVEKTYDTGKLRVPALRGVDLTVRRGEMVAIMGPSGCGKTTLLNCLSGLDTIDSG
TILIAGTDLSKLSDNARTEFRARQMGFVFQFYNLLPVLSAVENVELPLLVSGVRPKDARKRALEVLEQVGLAQWANHRPA
ELSGGQRQRVTIARALANQPAIVWADEPTGDLDSQTADEVMALMRHLNQTNQQTFVVVTHDPRIGAMCDRIIRMQDGRIV
SDDLVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_1775 YP_003320031.1 ABC transporter NC_008702.1.4606598. Protein 3e-40 47
Sthe_1775 YP_003320031.1 ABC transporter NC_012469.1.7686878. Protein 6e-45 46
Sthe_1775 YP_003320031.1 ABC transporter NC_012469.1.7685735. Protein 1e-39 43
Sthe_1775 YP_003320031.1 ABC transporter CP001581.1.gene798.p Protein 2e-41 42
Sthe_1775 YP_003320031.1 ABC transporter CP001581.1.gene598.p Protein 1e-40 41