Gene Information

Name : Sthe_1624 (Sthe_1624)
Accession : YP_003319880.1
Strain :
Genome accession: NC_013523
Putative virulence/resistance : Resistance
Product : binding-protein-dependent transport system inner membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 1788614 - 1789519 bp
Length : 906 bp
Strand : +
Note : PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tye:THEYE_A0929 oligopeptide transport system permease protein AppC

DNA sequence : 
ATGCAGTCGACCCACGAGCAGTCAGCAGCCGCCGTCGACAAACTGTCGGGCAACGCTCGCCCGCAACGGTCCGAGTTCTC
GCGGATCTGGCGCCGCTTCAGGCGCCACCGCCTGGGACTGGCAGGACTGACGTTCATCGGCCTGCTGGTCGTGACAGCGC
TGCTCGCCGATCTTCTCGCGCCCTACTCGCCCATCCAGTCCGTGAGCGGTATGCGCGGCGTCGGTCCGTCCTGGTCACAC
CCCCTCGGCTTTGACCACATCGGCAGGGACATCCTCAGCCGCATCATTTTCGGCACCCGCATCGCCCTCATCGTGGGAAT
CGGCGCCACGGGGATCGCGGTGACCATCGGAGTTCTGGTCGGCGCCACCGCGGGCTACTTCGGCGGCTGGGTGGACAATC
TGCTCTCCCGAGCAGTGGACACGCTGATGGCGTTCCCGACGCTCGTCCTGCTGATCGCCCTCACTGCCGTCGTCGGGCCG
AGCCTCCGGACCGTGGTGATCGTAATCGGAGCCACCGTGTGGGCGCAGTACGCCCGCGTCGTCCGCGCCGACACTATGAG
CCTCCGTGAGCGCGACTTCACGCTGGCCGCGCGTGTGGCAGGAGCCACCAATGCACGGATCATCTTCCGGCACCTCGTGC
CCAACGTCCTCGGTCCGGTGATCGTCCTGGCCAGCCTGGCGGTTGGAGGGATCATCATCTACGAGTCGACACTGTCGTTC
CTTGGCCTCGGCATTCAGCCCCCAGAACCCTCCTGGGGCGGGATGCTGGCCGACGGCCGTGCCTACATCGTGCACTACCC
CCACATCGCCATCGCTCCCGGGGTGATGATTACCTTGACCGTCCTTGCCTTCAATCTGCTCGGCGATGGCCTGCGCGACG
CGCTTGACCCGCGCACGCGCGACTGA

Protein sequence : 
MQSTHEQSAAAVDKLSGNARPQRSEFSRIWRRFRRHRLGLAGLTFIGLLVVTALLADLLAPYSPIQSVSGMRGVGPSWSH
PLGFDHIGRDILSRIIFGTRIALIVGIGATGIAVTIGVLVGATAGYFGGWVDNLLSRAVDTLMAFPTLVLLIALTAVVGP
SLRTVVIVIGATVWAQYARVVRADTMSLRERDFTLAARVAGATNARIIFRHLVPNVLGPVIVLASLAVGGIIIYESTLSF
LGLGIQPPEPSWGGMLADGRAYIVHYPHIAIAPGVMITLTVLAFNLLGDGLRDALDPRTRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 8e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_1624 YP_003319880.1 binding-protein-dependent transport system inner membrane protein BAC0272 Protein 1e-34 41