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Name : Taci_0039 (Taci_0039) Accession : YP_003316561.1 Strain : Thermanaerovibrio acidaminovorans DSM 6589 Genome accession: NC_013522 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 47078 - 48940 bp Length : 1863 bp Strand : - Note : PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: ppd:Ppro_3385 polys DNA sequence : ATGAAGAAATCGCTCCCCGCCCACACGTCGGCGGTTCGCAAGATCCTGCTGGATGTGGCCTGTGCTCTCGTTTCGTCCCT CGCAACCTTCGTCCTCAGGCTGGATCTGCCGCTGCCGGTCAATTTCGCCCCATCGCTGGTCCCCTACTCTATCCTGGCGA CGGCCACTAAGCTGGGTCTGATCCTTTGGTTGGGCACATGGCGCCAGTCCTGGCGGAACTCCTCGGTGCCGGATCTGATC CAGCTTCTGAAGGTCATGGTCGCCTTCGTGGTGATCATGTCCGGGGTGGGCTTCGTACTGGGCCCCGCAAACATGCCCCT CCCCCGGGGGATACCCTTCATTGACGGGGCCATCACTCTCCTCTTGTGGGGGGGCATTAGGCTTCTGGCCCGGGGTTTTC ACGAACGGGAGGGGCATAGCGGGTCCCACCTCAGGCCGGTGGTCATAGCCGGAGCGGGATCCGCAGGCACGTCGTTGGCC CGGGAGATCCAGAGAAACCGGTCCTGCGGCATGAGGGTAGCGGCCTTTCTGGACGATGACCCGGCGAAGCTGAAGATGAC CATCCTGGGCGTGCCTGTGGCGGGGACGCTGGACCAGCTTGGGGAGGTGCTGGACCGGTTCGGGGCCAGCGAGGTTTTGA TCGCGATGCCATCCGCCCCGGGTTCGGCGGTGAGGCTCGTCATGGAGCAGGCCTCATCCAGGCGGGTCCGGGCCAGGATA ATCCCCGCCATAGCGGAGGTCCTCTCCGGCCGGGTCTCCCTGGACCTGGTGAGGGACGTGGAGGTGGAGGACCTGCTTCG CCGTGAGGCGGTGCGGCTGGACCTGGATGAGATCGGCAGCTACCTGCGAGGTCAGCGGGTTATGATAACCGGCGCAGGAG GATCGATAGGAAGCGAGTTGGTCCGACAAGCGATCCCCTTCGGTCCGTCGCTCCTGGTGCTCCTCGGTCGAGGGGAGAAC AGCCTGCACCAACTTGAGATGGAGCTAAAGGGGATGGACCCGGTGCCTCCCTTCGTCACCGTAGTTGCGGACGTGAGGGA CAGGACCAGACTCGGAAGGGTTATAGCCCGTTACCGTCCATCGGTGGTGTTTCACGCGGCGGCCCACAAGCACGTTCCCA TGATGGAGGAACACCCGGAGGAGGCGGTAAAGAACAACGTGCTGGGGACGCTGAACGTGGTGGAGTGTTGCATTGAGGCT GGTGTATCAACCCTGGTCAACATATCCACCGACAAGGCGGTGAACCCAACGTCGGTGATGGGAGCATCCAAGCGGCTGGC GGAGATGGTGGTACGCCGGGTGGCGGACCGGGTGCCTCCGGGCGGAGCTTACGTGTCGGTTCGGTTCGGCAACGTGCTGG GCAGTCGAGGGAGCGTGGTCCCCCTGTTCAAGGAGCAGATCCGACGCGGAGGACCGGTTACGGTTACCGATCCGGAGATG GTACGCTACTTTATGACCATCCCGGAGGCGGCGCAGCTGGTGCTTCAGGCGGGGGGCATGGGGATGAACGGGGCGGTGTT CGTGTTGGACATGGGGGAACCGGTGAGGATCGTGGACATGGCGAGGGACCTGATCCGCCTATCGGGCTTGGAGCCCGATA GGGACATCCGTATAGAGTTCACCGGCCGTCGCCCGGGAGAGAAGCTGTACGAGGAGCTCTTGACCGCCGAGGAGGGAACC GAGGCCAGCCGGCACAGTAAGATCTTCGTGGCCAGGACGGAGCATATGGGTCTGGAGCTGGACCAGGTCATCCAACGTCT CAGCTTTGCTGCGGAGGTTGGGGACCAGGAAGCCATAAGGCGGATCCTGTCGGAGGCGATCCCGACCAGCCGTTTGGAGG GCATTGGCCCCGGGGGGGATTGA Protein sequence : MKKSLPAHTSAVRKILLDVACALVSSLATFVLRLDLPLPVNFAPSLVPYSILATATKLGLILWLGTWRQSWRNSSVPDLI QLLKVMVAFVVIMSGVGFVLGPANMPLPRGIPFIDGAITLLLWGGIRLLARGFHEREGHSGSHLRPVVIAGAGSAGTSLA REIQRNRSCGMRVAAFLDDDPAKLKMTILGVPVAGTLDQLGEVLDRFGASEVLIAMPSAPGSAVRLVMEQASSRRVRARI IPAIAEVLSGRVSLDLVRDVEVEDLLRREAVRLDLDEIGSYLRGQRVMITGAGGSIGSELVRQAIPFGPSLLVLLGRGEN SLHQLEMELKGMDPVPPFVTVVADVRDRTRLGRVIARYRPSVVFHAAAHKHVPMMEEHPEEAVKNNVLGTLNVVECCIEA GVSTLVNISTDKAVNPTSVMGASKRLAEMVVRRVADRVPPGGAYVSVRFGNVLGSRGSVVPLFKEQIRRGGPVTVTDPEM VRYFMTIPEAAQLVLQAGGMGMNGAVFVLDMGEPVRIVDMARDLIRLSGLEPDRDIRIEFTGRRPGEKLYEELLTAEEGT EASRHSKIFVARTEHMGLELDQVIQRLSFAAEVGDQEAIRRILSEAIPTSRLEGIGPGGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-81 | 45 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-79 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Taci_0039 | YP_003316561.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 4e-78 | 44 |
| Taci_0039 | YP_003316561.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 9e-66 | 44 |
