Gene Information

Name : Taci_1118 (Taci_1118)
Accession : YP_003317632.1
Strain : Thermanaerovibrio acidaminovorans DSM 6589
Genome accession: NC_013522
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 1174665 - 1176182 bp
Length : 1518 bp
Strand : -
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bha:BH0098 lysyl-tRNA synthetase

DNA sequence :
ATGAGCGACGCCAGCGACCGAGGTCAGGTTCAGGGTTGCATGCCTGAGGAGGAGATATTCCGTCAGCGGAAGGAGAAGCT
CTTCCGCCTTCGGGAGGAGGGGTACGACCCCTTCAGCATAGATAAGTTCGACCGTCAGCACTCGGTGGGCTACGTGCGGG
AGAGGTACGATCATCTGGCCCCGGACCAGGAGGGGGAGGAGCTCCTGTCCGTGGCGGGGCGGATCATGACCTTGAGGCGT
CACGGCAAGGCCTCCTTCGCCACCCTCGAGGAGGACAGCGGCAGGATCCAGCTCTACTTCCAGCTGGACCAGCTGGGGGA
GGAGTCCTACGGGTTCTTCAAGAAGTGGGTGGACACCGGGGACATCCTTGGGGTCAATGGAAGGGCCTTCAGGACCCAGC
GGGGGGAGCTGTCCATAAAGGTGACGGAGTTCAAGCTGCTCACCAAGGCCCTGAGGCCCCTGCCGGAGAAGTGGCATGGC
CTCAAGGACCAGGAGGTGCGTTACCGGCAGCGGTACCTGGACCTGATGGTCAACCCGGAGGTGCGGGAGACCTTCAGGAA
GAGGACCAGGATAATCCAGACGGTCCGTCGGGTCATGGAGTCCCACGGCACCCTGGAGGTCACCACCCCGATCCTTTCAA
CCCTGGCGGGGGGGGCCAACGCCAGGCCCTTCGTGACCTTCCATAACGCCCTGGGCATCCCCATGTACCTCCGGATAGCC
ACCGAGCTGTACCTGAAGCGGCTGGTGGTGGGAATGTTCGACCGGGTCTACGAGATAGGTCCCAACTTCAGGAACGAGGG
GATAGACCTGAAGCACAACCCGGAGTTCACCGCCATGGAGGTCTACTGGGCCTACGCCAACAACGAGGACATGATGAACC
TGTGCGAGGAGATCCTGGTGGCCTGCGCCGACGCGGTGGGGTCCAGGACCTTCACCTACCAGGGTAGGGAGATATGCTTC
GAGCCCCCCTTCAGGCGGGCCACCATGATGGACCTTGTGAGGGAGCACACCGGCATAGACTTCGAGATCATAAGTGACGA
GGAGGCCCGCCGGATCGCCCTGGAGCGGAAGGTGGTGGAGGAGCTCAAGGGGTACGAGACCCGGTATCACCTGCTGCCGG
AGTTCTTCGACGCCTACGTGGAGGACAAGCTTATCCAGCCCACCTTCGTGATAGGGCATCCCACAGTCATCTCCCCCCTG
GCCAAGAGGAACCCGGACAACCCGGACATAACCGACCGGTTTGAGCTGTTCGTCAACGGGTCCGAGCTGGCCAACGCCTT
CAGCGAGCTCAACGACCCCCTGGACCAGCGGGAGCGGTTCCTGGAGCAGGTGAGGCAGAAGGAGGCGGGGGACGATGAGG
CCCACGTGTTCGACGAGGACTTCATAAACGCCCTGGAGTACGGCCTGCCCCCAACGGGAGGCATGGGGATAGGGATAGAC
CGGCTGGTGATGCTCCTCACCGACTCCAAGTCCATAAGGGACGTGATCCTGTTCCCCACCATGAAGCCCAAGGCCTGA

Protein sequence :
MSDASDRGQVQGCMPEEEIFRQRKEKLFRLREEGYDPFSIDKFDRQHSVGYVRERYDHLAPDQEGEELLSVAGRIMTLRR
HGKASFATLEEDSGRIQLYFQLDQLGEESYGFFKKWVDTGDILGVNGRAFRTQRGELSIKVTEFKLLTKALRPLPEKWHG
LKDQEVRYRQRYLDLMVNPEVRETFRKRTRIIQTVRRVMESHGTLEVTTPILSTLAGGANARPFVTFHNALGIPMYLRIA
TELYLKRLVVGMFDRVYEIGPNFRNEGIDLKHNPEFTAMEVYWAYANNEDMMNLCEEILVACADAVGSRTFTYQGREICF
EPPFRRATMMDLVREHTGIDFEIISDEEARRIALERKVVEELKGYETRYHLLPEFFDAYVEDKLIQPTFVIGHPTVISPL
AKRNPDNPDITDRFELFVNGSELANAFSELNDPLDQRERFLEQVRQKEAGDDEAHVFDEDFINALEYGLPPTGGMGIGID
RLVMLLTDSKSIRDVILFPTMKPKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-101 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Taci_1118 YP_003317632.1 lysyl-tRNA synthetase VFG1668 Protein 2e-101 49