Gene Information

Name : Sked_09340 (Sked_09340)
Accession : YP_003313718.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Virulence
Product : chemotaxis protein CheY
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1074800 - 1075471 bp
Length : 672 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
GTGCTGGTCGTTGACGATGACACCGCGCTCGCAGAGATGATCGGACTGGTCCTCAAGACCGAGGGATTCGACCCGGTGTT
CTGCGCGGACGGAGACGCTGCGATCGGGATCTTCCGCAGCACGTCTCCCGATCTCGTCCTGCTCGACGTCATGCTCCCGG
GCAAGGACGGCACAGAGGTGTGCCGTCAGATCCGCGCGGAGTCGGGCGTGCCGGTCATCATGCTGACCGCCAAGAGCGAC
ACCGTCGACGTGGTCCAGGGGCTCGAGTCGGGGGCCGACGACTACATCTCGAAGCCCTTCAAGCCCAAGGAGCTCGTCGC
CCGGATCCGCGCGCGCCTGCGCCGGACCGACGAGCCTGCCCCAGAACGACTGAGCATCGGAGACCTCGAGATCGACGTGA
CGGGCCACCGGGTCACGCGCGCCGGAGCCGCCATCTCGCTGACCCCCCTCGAGTTCGACCTGCTCGTCGCCCTCGCCCGC
AAGCCCTGGCAGGTGTTCTCCCGCGAGGTCCTCCTCGAGAAGGTCTGGGGCTACCGGCACGCGGCCGACACCCGCCTCGT
CAACGTCCACGTGCAGCGCCTGCGCTCGAAGATCGAGCACGACCCCGAGGTCCCCGAGATCGTGCTGACCGTCCGCGGCG
TCGGGTACAAGGCTGGCGCAGCGACCACATGA

Protein sequence : 
MLVVDDDTALAEMIGLVLKTEGFDPVFCADGDAAIGIFRSTSPDLVLLDVMLPGKDGTEVCRQIRAESGVPVIMLTAKSD
TVDVVQGLESGADDYISKPFKPKELVARIRARLRRTDEPAPERLSIGDLEIDVTGHRVTRAGAAISLTPLEFDLLVALAR
KPWQVFSREVLLEKVWGYRHAADTRLVNVHVQRLRSKIEHDPEVPEIVLTVRGVGYKAGAATT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_09340 YP_003313718.1 chemotaxis protein CheY AE000516.2.gene3505. Protein 5e-72 72
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_012469.1.7685629. Protein 1e-43 45
Sked_09340 YP_003313718.1 chemotaxis protein CheY BAC0125 Protein 9e-35 45
Sked_09340 YP_003313718.1 chemotaxis protein CheY AE015929.1.gene1106. Protein 9e-34 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_002952.2859905.p0 Protein 1e-43 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_007622.3794472.p0 Protein 1e-43 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_002745.1124361.p0 Protein 1e-43 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_009782.5559369.p0 Protein 1e-43 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_002951.3237708.p0 Protein 1e-43 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_003923.1003749.p0 Protein 9e-44 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_002758.1121668.p0 Protein 1e-43 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_009641.5332272.p0 Protein 1e-43 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_013450.8614421.p0 Protein 1e-43 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_007793.3914279.p0 Protein 1e-43 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY HE999704.1.gene2815. Protein 1e-41 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_007622.3794948.p0 Protein 2e-37 43
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_003923.1003417.p0 Protein 2e-37 43
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_013450.8614146.p0 Protein 2e-37 43
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_002951.3238224.p0 Protein 2e-37 43
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_007793.3914065.p0 Protein 2e-37 43
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_002758.1121390.p0 Protein 2e-37 43
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_010079.5776364.p0 Protein 2e-37 43
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_002952.2859858.p0 Protein 2e-37 43
Sked_09340 YP_003313718.1 chemotaxis protein CheY AF155139.2.orf0.gene Protein 1e-37 42
Sked_09340 YP_003313718.1 chemotaxis protein CheY CP000675.2.gene1535. Protein 4e-33 42
Sked_09340 YP_003313718.1 chemotaxis protein CheY NC_012469.1.7686381. Protein 2e-41 42
Sked_09340 YP_003313718.1 chemotaxis protein CheY HE999704.1.gene1528. Protein 3e-33 41
Sked_09340 YP_003313718.1 chemotaxis protein CheY BAC0083 Protein 1e-30 41
Sked_09340 YP_003313718.1 chemotaxis protein CheY BAC0197 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_09340 YP_003313718.1 chemotaxis protein CheY VFG1389 Protein 1e-30 44
Sked_09340 YP_003313718.1 chemotaxis protein CheY VFG1390 Protein 4e-34 43
Sked_09340 YP_003313718.1 chemotaxis protein CheY VFG1702 Protein 2e-35 41