Gene Information

Name : Sked_09200 (Sked_09200)
Accession : YP_003313704.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline transport ATP binding subunit
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : 3.6.3.32
Position : 1050482 - 1051819 bp
Length : 1338 bp
Strand : -
Note : PFAM: CBS domain pair; ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit

DNA sequence :
GTGCAGGTCGAGAACGTCTACAAGATCTTCGGCCGCCGCTCTGGCGAGGCCGCCCGCAAGCTCAAGGCCGGTGCGACCCG
CGCCGACGTCGCCAGCCTCGGCACCGCCGCGGTCATCGACGCCAGCTTCGAGGTCGCCAAGGGCGAGATCTTCGTCGTCA
TGGGCCTGTCGGGCTCGGGCAAGTCGACGCTCATCCGCATGCTCAACGGCCTGTGGAAGCCGACGTCCGGGACCGTGCGC
CTCGGCGGCCAGGACATCAACGCCGTCGGCGCCAAGAAGCTCCGCGACATCCGCCAGAAGAGCGTGAGCATGGTGTTCCA
GCACTTCGCGCTCATGCCGCACCGCACCGTCCTCGACAACGCGGCGTACCCGCTCGAGATCCAGGGCATGGGCAAGGCGC
AGCGGCTCGAGAAGGCCCGCACCGCCCTCGACCTCGTCGGGCTCACCGACTGGGCCGACAAGCTGCCCTCGCAGCTCTCG
GGTGGCATGCGTCAGCGCGTGGGCCTCGCCCGCGCCCTGACCGCCGACACCGACGTGCTGCTCATGGACGAGGCCTTCTC
GGCCCTCGACCCGCTGATCCGCCGCGAGATGCAGGAGCAGCTCGTCGAGCTGCAGAGCAAGCTCGGCAAGACCATCGTCT
TCATCACGCACGACCTCAACGAGGCCATGTTCCTCGGCGACCGCATCGCCGTCATGCGCGACGGTCGCATCGTGCAGATC
GGGTCCTCCGAGGAGATCCTCTCCGACCCGGCCAACGACTACGTCGCGCAGTTCGTCGCCGACGTCGACCGCACCCGTGT
GCTCACCGCGTCGTCGCTCATGCACCGACCGGCCGCCATGGTGCCGCTGTCGGCAGGGCCGCGCGTCGCCTCCCGCACCA
TGCGCGAGGCGCAGGTGCAGGCCGCGTACGTGGTGGACCGCTCGCGGAAGCTGCGCGGCGTCGTCTACGACTCCGAGGTC
GTCGACGCCCTGCGCGCCGGCACCACCTCGCTCGAGACCCTCGTCCGCGACGACCTCACCGCGGTGGACCAGGACGCCTC
GCTCGCCGAGATCTTCCTGCCCGCCACGGAGTCCCCGCTCCCGGTCCCGGTGACCGACTCCGAGGGGCGCCTCGTCGGCG
TCGTGCCTCGCGTCGTGCTGCTGCAGGCCATGGTGCCCCCGCACCTCGAGGACTCCGCGCACGACGAGACCGCCGCCGCA
GAAGACACCGACACCACGGACGCCGCTGCGCAGACCGCAGCCGCGCAGCCAGCGACGAGCGCCGGAGCCGCTGACGCGGC
CGCCGCAGCGCCCCTGCCTGCCGACGCGTCCGAGCAGACGACAGGAGAACGCCCGTGA

Protein sequence :
MQVENVYKIFGRRSGEAARKLKAGATRADVASLGTAAVIDASFEVAKGEIFVVMGLSGSGKSTLIRMLNGLWKPTSGTVR
LGGQDINAVGAKKLRDIRQKSVSMVFQHFALMPHRTVLDNAAYPLEIQGMGKAQRLEKARTALDLVGLTDWADKLPSQLS
GGMRQRVGLARALTADTDVLLMDEAFSALDPLIRREMQEQLVELQSKLGKTIVFITHDLNEAMFLGDRIAVMRDGRIVQI
GSSEEILSDPANDYVAQFVADVDRTRVLTASSLMHRPAAMVPLSAGPRVASRTMREAQVQAAYVVDRSRKLRGVVYDSEV
VDALRAGTTSLETLVRDDLTAVDQDASLAEIFLPATESPLPVPVTDSEGRLVGVVPRVVLLQAMVPPHLEDSAHDETAAA
EDTDTTDAAAQTAAAQPATSAGAADAAAAAPLPADASEQTTGERP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 3e-84 48