Gene Information

Name : Sked_37500 (Sked_37500)
Accession : YP_003316467.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Virulence
Product : chemotaxis protein CheY
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4192265 - 4192942 bp
Length : 678 bp
Strand : -
Note : PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain

DNA sequence : 
ATGCGGATCCTGGTGGTGGACGACGAGGTGCGGCTGGTCGACGGTGTGCGGCGCGGTCTCGAGGCCGAGGGCTTCGCGGT
CGACGTGGCGGCGAACGGGGTCGACGGACTGTGGATGGCCCAGGAGCACCGGTACGACGCGATCGTGCTCGACATCATGA
TGCCGGGCATGAACGGGTACACGGTGTGCGAGCGGCTGCGTGCGGCCGAGGACTGGACGCCGATCCTCATGCTGACCGCC
AAGGACGGCGAGTGGGACCAGGTCGAGGCTCTCGACACCGGTGCCGACGACTTCCTCAGCAAGCCCTTCTCGTACGCGGT
CCTCGTGGCGCGGCTGCGCTCCCTGGTGCGCCGGGGCTCCCGCGAGCGGCCCGTGGTGCTCGAGGCGGGCGACCTGCAGC
TCGACCCGGCAGCCCGGAGGGTGCGTCGCGGTGACGTCGAGATCGAGCTGACCTCGCGCGAGTTCGCCGTGCTGGAGTTC
CTCATCCGCAACGCCGGGGACGTGGTGTCCAAGCGTCAGGTGCTCGACAACGTGTGGGACGGCGACTTCGAGGGTGACCC
GAACATCGTCGAGGTGTACGTGCGCCACCTGCGCAACAAGGTCGACCGGCCCTTCGGGCGCGCGTCGATCGAGACGCTGC
GCGGCGCCGGGTACCGGCTGGCGGTCGGGCGTGGCTGA

Protein sequence : 
MRILVVDDEVRLVDGVRRGLEAEGFAVDVAANGVDGLWMAQEHRYDAIVLDIMMPGMNGYTVCERLRAAEDWTPILMLTA
KDGEWDQVEALDTGADDFLSKPFSYAVLVARLRSLVRRGSRERPVVLEAGDLQLDPAARRVRRGDVEIELTSREFAVLEF
LIRNAGDVVSKRQVLDNVWDGDFEGDPNIVEVYVRHLRNKVDRPFGRASIETLRGAGYRLAVGRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_37500 YP_003316467.1 chemotaxis protein CheY BAC0125 Protein 3e-41 47
Sked_37500 YP_003316467.1 chemotaxis protein CheY BAC0083 Protein 8e-35 45
Sked_37500 YP_003316467.1 chemotaxis protein CheY BAC0197 Protein 2e-34 44
Sked_37500 YP_003316467.1 chemotaxis protein CheY Y16952.3.orf35.gene. Protein 2e-25 42
Sked_37500 YP_003316467.1 chemotaxis protein CheY BAC0111 Protein 3e-36 41
Sked_37500 YP_003316467.1 chemotaxis protein CheY BAC0308 Protein 6e-33 41
Sked_37500 YP_003316467.1 chemotaxis protein CheY U82965.2.orf14.gene. Protein 2e-25 41
Sked_37500 YP_003316467.1 chemotaxis protein CheY BAC0638 Protein 5e-27 41
Sked_37500 YP_003316467.1 chemotaxis protein CheY AE000516.2.gene3505. Protein 4e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_37500 YP_003316467.1 chemotaxis protein CheY VFG1390 Protein 2e-36 44
Sked_37500 YP_003316467.1 chemotaxis protein CheY VFG1386 Protein 1e-31 43
Sked_37500 YP_003316467.1 chemotaxis protein CheY VFG0596 Protein 1e-33 41