Gene Information

Name : Sked_37310 (Sked_37310)
Accession : YP_003316448.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Virulence
Product : enterobactin ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 4170200 - 4171321 bp
Length : 1122 bp
Strand : -
Note : PFAM: FecCD transport family

DNA sequence :
GTGAGCACCGACCTCCAGCAGGCCGGGGCGACACCGACGCCCGGTCAGACACCTCCCACGCCAGGTGCGGTCTCGCGCGT
CAGCAGCGGGCGACCGACCTGGACGCTCCGGCTCGCCCGGGGCCGGCTGTCCGGCCGGGTCGACGTGCGCACCCTCGTGG
TGCTCGTCTCCCTCACGGTCGTCGCGCTCGGCGTCGGTCTCGTCGCCCTCGGCGTCGGCGACTACGAGGTGGCCGTCCCC
GACGTCCTGCAGGCCCTCTTCGGTGAGACCACGTCGGTGGTGCGCATGGTCGTCGTCGACTGGCGGCTGCCCCGCGTGCT
CCTCGCGCTGCTGCTCGGCGCCGCGCTCGGCGCGAGCGGTGCGATCTTCCAGTCGATGACCCGCAACCCGCTCGGCAGCC
CCGACATCATCGGCTTCAACACCGGTGCGTACACCGGTGCGCTCGTGGTCATCCTGCTGCTCGGCGGCTCGTACTACGAC
ATCGCCGCCGGCGCGATGGTCGGCGGCCTCGTGACCGCCGGTCTCGTCTACGCCCTCGCCTACCGCGGCGGGGCGCAAGG
GTTCCGGCTGATCATCGTGGGCATCGCGATCAGCGCCGTCCTCGCCTCAGTCAACACCTGGCTCATCATCAAGGCCGACC
TCGAGAAGGCCATGAGCGCGGCGACCTGGGGCGCCGGCTCCCTCAACGGGCTCTCGTGGGCGCAGGTGGGTCCGGTCGTC
ATCATCCTGGTCGTCCTGGTGCCCGCCCTCGTGGTGCTCAGCCGACGCATGGGGATCCTCGAGATGGGTGACGACGCCGC
CCAGGCCCTCGGCGTCCGCACCGAGCCGACCCGGCTCGCCATGCTCGTGGTGGGTGTGGCGCTCACCGCGCTCGTCACCG
CGGCCGCCGGGCCCATCGCCTTCATCTCGCTGGCCGCCCCGCAGCTCGCGCGGCGCCTCACCCGCAGCCCGTCGGTCGCG
ATGCTGCCCTCCGCCGTGCTCGGTGCACTCCTGCTGGTGGTGAGCGACCTCGCCGCGCAGCGGGTGTTCGCACCGACCCA
GCTCCCCGTCGGCGTCGTCACCGTGAGCGTCGGCGGCTGCTACCTCGTGTGGCTGCTCGCCCGAGAGGCGCGACGGCAGT
GA

Protein sequence :
MSTDLQQAGATPTPGQTPPTPGAVSRVSSGRPTWTLRLARGRLSGRVDVRTLVVLVSLTVVALGVGLVALGVGDYEVAVP
DVLQALFGETTSVVRMVVVDWRLPRVLLALLLGAALGASGAIFQSMTRNPLGSPDIIGFNTGAYTGALVVILLLGGSYYD
IAAGAMVGGLVTAGLVYALAYRGGAQGFRLIIVGIAISAVLASVNTWLIIKADLEKAMSAATWGAGSLNGLSWAQVGPVV
IILVVLVPALVVLSRRMGILEMGDDAAQALGVRTEPTRLAMLVVGVALTALVTAAAGPIAFISLAAPQLARRLTRSPSVA
MLPSAVLGALLLVVSDLAAQRVFAPTQLPVGVVTVSVGGCYLVWLLAREARRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-44 52
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 8e-45 52
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 8e-45 52
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 8e-45 52
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 7e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_37310 YP_003316448.1 enterobactin ABC transporter permease VFG0928 Protein 4e-48 56