Gene Information

Name : Sked_03500 (Sked_03500)
Accession : YP_003313151.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Resistance
Product : multidrug ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 387672 - 388430 bp
Length : 759 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGATCCAGGTAGAGGCGCTGACCAAGCGCTACGGGACGACCACGGCGGTCGACGGGCTGAGCTTCACGGCCAGCCCCGG
GACCGTCACCGGGTTCCTCGGCCCCAACGGCGCCGGGAAGTCCACGACCATGCGGATGATCGTCGGGCTCGAGCGCCCCA
CCTCGGGGACCGCGACCGTCGACGGCCGCCGCTACGCGGACCTGCCGGCGCCGCTGCACTCCGTCGGCGTCATGCTCGAC
GCCCGGTCGGTGCACCCCGGCCGCACGGCGTACCGACACCTGCTGGCCCACGCCCGCACCCACGGCATCGGCAAGGCCCG
AGTCCGGGAGGTCATCGAGATGACCGGCCTGGAGTCCGTCGCCCGCCGCCGCGCCGGGACCTTCTCCCTCGGGATGGGGC
AGCGCCTCGGGATCGCGACGGCCCTGCTGGGCGACCCGCAGACGCTCATCCTCGACGAGCCCGTCAACGGCCTCGACCCC
GACGGCGTCCTCTGGGTCCGCCGCCTCGTCCGTGACCTCGCCGCGGAGGGGCGCACCGTCCTGCTGTCCTCCCACCTCAT
GCACGAGCTCGCGCTGTGCGCGGACCGGGTGGTCATCATCGGCAAGGGGCGCCTGCTCGCCGACGCCCCGGTCCAGGAGA
TCGTCGACCGCTCGGCGGGCGGCTCCCTCGAGGAGGCGTACCTCGAGCTCACCTCCGGGTCGGTCGAGTACCGCGGCCGC
GCCGCCGGCGAGACCTCGACGTCGGGAGGTGCACGATGA

Protein sequence :
MIQVEALTKRYGTTTAVDGLSFTASPGTVTGFLGPNGAGKSTTMRMIVGLERPTSGTATVDGRRYADLPAPLHSVGVMLD
ARSVHPGRTAYRHLLAHARTHGIGKARVREVIEMTGLESVARRRAGTFSLGMGQRLGIATALLGDPQTLILDEPVNGLDP
DGVLWVRRLVRDLAAEGRTVLLSSHLMHELALCADRVVIIGKGRLLADAPVQEIVDRSAGGSLEEAYLELTSGSVEYRGR
AAGETSTSGGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 4e-50 47
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 6e-50 46
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 6e-50 46
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 5e-47 44