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Name : Sked_34820 (Sked_34820) Accession : YP_003316204.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Unknown Product : transcriptional accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 3890957 - 3893407 bp Length : 2451 bp Strand : + Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region DNA sequence : ATGCCTCTTCTCACTCTCCCGTCGGTGTCCCGCCGGATCGCCGACGAGCTCGCCGTCGGCGAGCACCAGGTGTCCGCCGC GGTCGCGTTGCTCGACGGCGGCGCGACGGTGCCTTTTGTCGCCCGCTACCGCAAGGAGGCGACCGGGGGCCTCGACGACG CCCAGCTGCGCACGCTCGACGAGAGGCTGCGGTACCTGCGCGAGCTCGACGCCCGCCGTACCGCGGTCCTCGCCTCGATC GAGGAGCAGGGGCGCCTCGACGACGCGCTCCGGGCCTCGATCATGGCCGCCGAGACCAAGTCGCGGCTCGAGGACATCTA CCTGCCGTTCAAGCCGCGCCGCCGGACCAAGGCGCAGATCGCCCGCGAGGCCGGGCTCGAGCCGCTCGCCGACCTCCTCC TGGCCGAGCCCGGCCGTGACCCGGAGACCGAGGCCGGTGCCTACGTCGACGCGGACCGCGGGGTCGCCGACACGCAGGTC GCCCTCGACGGCGCCCGGTCGATCCTCGTCGAACGGTTCACCGAGGACGCCGACCTCGTCGGCGAGCTCCGCGAGCGCGC CTGGAAGGCCGGGGACCTCGTCGCCCGTGTCGTCGCGGGCCAGGAGACGGCGGGCGAGAAGTTCTCCGACTACTTCGACC ACCGCGAACGGCTCACGAGGGCACCCTCGCACCGCATCCTCGCGATGCTCCGCGGCGAGAAGGAGGGCGTCCTCCTGCTC GACCTGGACCTCGACCCGCAGCCGGACGGCGCACGCCCGGTCCGCGGCGAGCCGTCCTCCTACGAGCGCAGCATCGCCGC ACGGTTCAGGATCCAGGCGGCCGGGCGCCCCGGTGACGTCTGGCTGGCCGAGACCGTCCGCCTCGCCTGGCGCGGCAGGG TGGGCACCCGGGTCGACATCGACCTGCGGCTGCGCCTCCGCGAGCGCGCCGAGAAGGACGCGATCGGCGTGTTCGCCGCG AACCTCCGTGACCTGCTGCTCGCCGCACCGGCCGGGCCGCGGGCCACGCTCGGGCTCGACCCGGGCTACCGCACCGGCGT GAAGGTCGCCGTCGTCGACAGCACCGGCAAGGCCGTCGACACGGCGGTCGTCTACCCGCACCAGGGGTCGGGCCGCTGGG ACCAGTCGCTGGCCACGCTCTCCGCGCTGGTCACCAAGTACTCCGTCGAGCTCGTCGCCATCGGCAACGGCACCGCCTCC CGCGAGACCGACACGCTCGCGGGCCAGCTCGTGGGCCGTCACCCCGGCCTCACCAAGGTCGTGGTCTCCGAGGCGGGCGC CTCGGTGTACTCGGCCTCCGCGTACGCGAGCGCCGAGCTCCCGGGCATGGACGTGTCGCTGCGCGGTGCGGTGTCCATCG CACGACGCCTGCAGGACCCGCTCGCCGAGCTCGTCAAGATCGACGCGCGGTCGATCGGCGTCGGCCAGTACCAGCACGAC CTGCCGCAGGGTGACCTGTCGCGGTCCCTCGACGCCGTGGTGGAGGACGCCGTCAACGGCGTCGGCGTGGACGTCAACAC CGCCTCGGTGCCTCTGCTGACGCGGGTGTCCGGCCTGAGCACCTCGCTGGCAGAGTCGATCGTCGCGCACCGGGACGCCC ACGGGGCGTTCACCTCGCGCCGGGCCCTCAAGGCCGTGCCGCGCCTCGGTCCGAAGGCCTTCGAGCAGGCCGCCGGGTTC CTGCGCGTGCGGGGCGGGGACGAGCCGCTCGACGCCTCTGCCGTGCACCCTGAGTCCTACCCGGTGGCACGCGCCATGGC GGCGAAGGCCCGCTGCGGACTGGGCGAGCTCATCGGCAGCACCGAGACGCTCCGCGGGCTCCAGCCGGTCGACTTCGTGG ACGAGCGCCACGGGCTCCCGACGGTCCTCGACGTCCTCGCCGAGCTCGAGAAGCCCGGCCGGGACCCCCGCCCCACCTTC GCCACCGCACGCTTCGCCGACGGCGTCGAGAAGGTCGCCGACCTGGTGCCCGGGATGGTGCTCGAGGGCGTCGTCACCAA CTGCGCGGCCTTCGGGGCCTTCGTCGACGTCGGGGTCCACCAGGACGGGCTCGTGCACGTCTCGGCGCTGTCGGACCGGT TCGTCTCCGACCCGCGGGAGGTCGTCAAGCCTGGCGACGTCGTCACCGTCAAGGTGCTCACCGTCGACGTGCGGCGTGGT CGGATCGGCCTGACGCTCCGGCTCGAGGACCCCGTCCCGGGCGCTGGCGGGGCTGATGCTGATGGGAGCACGGGGAAGAC CAGGGGCGACGGTACGACCCGGGGCACTCGGACGGACAAGAGCGCTGAGGGTGCCAGGAGCACCGGGGCTGCCGAGGACG GCCGGCGACGCGGGCGCCCGGAGAAGGATCGGCCAGCACAGGGCCGAGGGCGCGGTTCCTCCGGGAGACCACCCGCACCC GAGGGAGCGATGGCCGAGGCCCTGCGCCGAGCAGGGCTCAGCCCGAGCTGA Protein sequence : MPLLTLPSVSRRIADELAVGEHQVSAAVALLDGGATVPFVARYRKEATGGLDDAQLRTLDERLRYLRELDARRTAVLASI EEQGRLDDALRASIMAAETKSRLEDIYLPFKPRRRTKAQIAREAGLEPLADLLLAEPGRDPETEAGAYVDADRGVADTQV ALDGARSILVERFTEDADLVGELRERAWKAGDLVARVVAGQETAGEKFSDYFDHRERLTRAPSHRILAMLRGEKEGVLLL DLDLDPQPDGARPVRGEPSSYERSIAARFRIQAAGRPGDVWLAETVRLAWRGRVGTRVDIDLRLRLRERAEKDAIGVFAA NLRDLLLAAPAGPRATLGLDPGYRTGVKVAVVDSTGKAVDTAVVYPHQGSGRWDQSLATLSALVTKYSVELVAIGNGTAS RETDTLAGQLVGRHPGLTKVVVSEAGASVYSASAYASAELPGMDVSLRGAVSIARRLQDPLAELVKIDARSIGVGQYQHD LPQGDLSRSLDAVVEDAVNGVGVDVNTASVPLLTRVSGLSTSLAESIVAHRDAHGAFTSRRALKAVPRLGPKAFEQAAGF LRVRGGDEPLDASAVHPESYPVARAMAAKARCGLGELIGSTETLRGLQPVDFVDERHGLPTVLDVLAELEKPGRDPRPTF ATARFADGVEKVADLVPGMVLEGVVTNCAAFGAFVDVGVHQDGLVHVSALSDRFVSDPREVVKPGDVVTVKVLTVDVRRG RIGLTLRLEDPVPGAGGADADGSTGKTRGDGTTRGTRTDKSAEGARSTGAAEDGRRRGRPEKDRPAQGRGRGSSGRPPAP EGAMAEALRRAGLSPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 62 |
