Gene Information

Name : Sked_34660 (Sked_34660)
Accession : YP_003316188.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Resistance
Product : amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 3873510 - 3874292 bp
Length : 783 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGAGCACCGTCATCACCGGCACCCGCGGCCTCCTCGAGGTCCACGGCGTCCACAAGAGCTACGGCACCCTCGAGGTCCT
CCACGACGTCGACCTCACGGTCCAGCCGGGCGAGGTCACCGTGATCCTCGGCCCGTCGGGCTCGGGCAAGTCGACCCTGC
TCCGGGTGGTCAACCACCTCGAGAAGGTCGACAGCGGGTTCGTCGCCCTCGACGGCGACCTCATCGGGTACTCGCGCAGC
GGCGACACGCTCCGCGAGCTCAAGGAGAAGGCGATCCTCGCCCAGCGGACGCAGATCGGCTTCGTGTTCCAGAGCTTCAA
CCTCTTCCCGCACCTCACCGTCCTCGAGAACGTCGTCGAGGCACCGGTGAGCGCACAGGGCCGCAAGCGGTCCGAGGTCG
AGGTCGAGGCCCGCGAGCTCCTGGCCCGCGTCGGCCTGGCCGACAAGGCCGACGCCCGGCCGCGCCAGCTCTCCGGCGGC
CAGCAGCAGCGCGTCGCGATCGCCCGGGCCCTGGCCACCAAGCCACGGCTCCTGCTCTTCGACGAGCCGACGTCGGCCCT
CGACCCCGAGCTCGTCGGCGAGGTCCTCGACGTCATCAAGGCCCTCGCGCACGACGGCACGACCCTCGTGGTCGTCACCC
ACGAGATCGGCTTCGCCCGCGAGGTCGCCGACACCGTCGTGTTCATGGACTCCGGCCGCATCGTCGAGCAGGGCCCCGCG
GCCCAGGTCATCGACGACCCGCAGCACGCCCGCACCAAGGCGTTCCTCGACAAGGTCCTCTGA

Protein sequence :
MSTVITGTRGLLEVHGVHKSYGTLEVLHDVDLTVQPGEVTVILGPSGSGKSTLLRVVNHLEKVDSGFVALDGDLIGYSRS
GDTLRELKEKAILAQRTQIGFVFQSFNLFPHLTVLENVVEAPVSAQGRKRSEVEVEARELLARVGLADKADARPRQLSGG
QQQRVAIARALATKPRLLLFDEPTSALDPELVGEVLDVIKALAHDGTTLVVVTHEIGFAREVADTVVFMDSGRIVEQGPA
AQVIDDPQHARTKAFLDKVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-17 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_34660 YP_003316188.1 amino acid ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-25 42