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Name : Sked_31970 (Sked_31970) Accession : YP_003315927.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase (class II) Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3555901 - 3557433 bp Length : 1533 bp Strand : - Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : GTGACTTCTGAGCAGACCCCCGCGACCGCAGACCCCACTCTCGCCGACGGGGAGAACGACCTCCCCGAGCAGCTGCGGGT GCGTCGGGAGAAGCGCGACCGGCTGCTCGAGAGCGGCGTCGAGGCCTACCCGGTCGAGGTGCCCCGCACGCACTCGATCG CCGAGGTCCGCGCGCAGTACGCGCACCTCGAGACGGGCGAGGAGACCGACGACCTCGTCGGCGTCGCCGGTCGTGTCGTG TTCCTGCGCAACTCCGGCAAGCTCTGCTTCGTCTCGCTCCAGGACGGCGAGGGCAACCGCCTCCAGATCATGCTGAGCCT CGCGGTCGTCGGCGAGGAGTCGCTCGCCGCGTTCAAGGCAGACGTCGACCTCGGTGACCACCTCTTCGCGCACGGTCGCG TGGGCAGCTCGCGCCGCGGCGAGCTGAGCGTCTTCGCGGACTCGTGGCAGATCGCCGCGAAGGCGCTCCGCCCCCTCCCG GTGCTCCACCGTGAGCTCTCGGAGGAGGCCCGCGTCCGTCAGCGCTACGTGGACCTCATCGCGCGCCCGGCGGCCCGCGA GGCGGCGCGCCTGCGCGCCGGCGTGGTCCGGTCCCTGCGCGAGAACTTCCACGACCGCGGGTACATGGAGATCGAGACCC CGATGCTCCAGACCATCCACGGCGGTGCGGCCGCCCGGCCTTTCACCACGCACATGAATGCTTTCGACATCGACCTGTTC CTGCGGATCGCCCCCGAGCTGTTCCTCAAGAGGGCCGTGGTCGGCGGTATCGAGCGCGTCTTCGAGATCAACCGCAACTT CCGGAACGAGGGTGCTGACTCCACGCACTCCCCGGAGTTCGCGATGCTCGAGGCCTACGAGGCATATGGCGACTACAACT CCATGGCGGTGCTCACCAAGAATCTTGTCCAGAAGGCGGCTCTCGACATGTTCGGGACCACTCTCGTGACGCTCGCCTCG GGCGAGGAGTACGAGCTCGGCGGCGACTGGGCCGAGCTCACCATGTACGGGTCGTTGTCGGAGGCCCTCGGCGAGGAGAT CACCCCGCAGACCACCGTCGCGCGGCTCACGGAGCTCGCGGACGCCGTCGAGATCTCGATCGACCCGAAGAAGGTCAACC ACGGAAAGCTCGTCGAAGAGCTCTGGGAGCACCACGTCGGCAATTCTCTCTACGCGCCGACCTTCGTCCGGGACTTCCCC GTCGAGACCTCGCCGTTGACGCGCGACCACCGCTCTGTCCCCGGGCAGGTCGAGAAGTGGGACCTGTACGTCCGTGGTTT CGAGCTCGCGACCGCGTACTCCGAGCTGGTGGACCCGGTCGTCCAGCGCCAGCGCTTCGAGGCGCAGGCGGTCCTCGCAG CTGCGGGCGACGACGAGGCGATGGTGCTCGACGAGGACTTCCTCACGGCGATGGAGTACGCGATGCCGCCGAGCGGGGGC ATGGGGATGGGCCTCGACCGCCTGCTCATGGCGCTGACGGGTCTGGGGATCCGCGAGACGATCCTGTTCCCGCTGGTCAA GCCGCAGCGTTGA Protein sequence : MTSEQTPATADPTLADGENDLPEQLRVRREKRDRLLESGVEAYPVEVPRTHSIAEVRAQYAHLETGEETDDLVGVAGRVV FLRNSGKLCFVSLQDGEGNRLQIMLSLAVVGEESLAAFKADVDLGDHLFAHGRVGSSRRGELSVFADSWQIAAKALRPLP VLHRELSEEARVRQRYVDLIARPAAREAARLRAGVVRSLRENFHDRGYMEIETPMLQTIHGGAAARPFTTHMNAFDIDLF LRIAPELFLKRAVVGGIERVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDYNSMAVLTKNLVQKAALDMFGTTLVTLAS GEEYELGGDWAELTMYGSLSEALGEEITPQTTVARLTELADAVEISIDPKKVNHGKLVEELWEHHVGNSLYAPTFVRDFP VETSPLTRDHRSVPGQVEKWDLYVRGFELATAYSELVDPVVQRQRFEAQAVLAAAGDDEAMVLDEDFLTAMEYAMPPSGG MGMGLDRLLMALTGLGIRETILFPLVKPQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-147 | 61 |
