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Name : Sked_31510 (Sked_31510) Accession : YP_003315882.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Unknown Product : glycosidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.10 Position : 3505611 - 3507401 bp Length : 1791 bp Strand : - Note : PFAM: Alpha amylase, catalytic domain DNA sequence : ATGACACGTCTGACACCCCAGGCACAGGGACCCGCCGCCGGCACAGGCACGTCAGGCCCGGGGGCCGCCCCGCCGGCCTG GTGGACCCGGGCCGTCGTCTACCAGGTGTACCCGCGCAGCTTCGCCGACTCGGACGGCGACGGCGTCGGCGACCTCGGCG GGATCCTGTCCCGGCTCGACCACCTCGCCGACCTCGGGGTCGACGTGATCTGGCTGTCGCCGGTCTACCCCTCGCCGCAG CACGACAACGGGTACGACATCTCCGACTACGAGGGCATCGACCCGCTCTTCGGCACCCTCGAGGACTTCGACGCGCTGCT CGCCGAGGTGCACGCCCGGGGCATGAAGCTCGTCATGGACCTGGTGGTCAACCACACGAGCGACCAGCACCCCTGGTTCC AGGAGTCGCGGTCGTCCCTGACCAGCCCGAAGCGCGACTGGTACTGGTGGCGCGACGCACGCACCGTCACGGAGTCCGCG CTGCCCGTCGAGCCCGCGGTGCCCGTCGAGCCCGCCGAGGAGCCGCGGCCCGTCGAGCCCAACGACTGGCGCTCCGCCTT CAGCGGGCCGGCGTGGACCTTCGACGAGCCGACCGGCCAGTTCTACCTGCACCTCTTCGCGCCGCAGCAGCCCGACCTCA ACTGGGAGAACCCCGAGGTCCGGCAGGCCGTCTACGCGATGATGAACCGGTGGCTGGACCGTGGGGTCGACGGCTTCCGC ATGGACGTCATCAACCTCGTGTCCAAGCGTCTCGAGCAGGTCGACGGGGGAGCGGAGGCGTCCGGGATCGGGTTCCAGAC GGGACCGCGCCTGCACGAGTTCCTCCACGAGATGCACGAGGCCGTCTTCGCTGGCCGGGACTCCGACCTCATCACCGTGG GCGAGATGCCGGGGATCACCGTCGAGGAGGCGCGACTGGTCACCGACCCTGCGCGTCGTGAGCTCGACATGGTGTTCCAG TTCGAGCACGTGTCCCTCGACCAGGGGGCCGACAAGTTCGACCCCCGACCGCTCGACCTCGTCGCCCTCAAGCGGTCCCT CGGCCGCTGGCAGGAAGGGCTCGCGGACGTCGGCTGGAACAGCCTGTACCTCGACAACCACGACCAGCCCCGGCTCGTGT CGCGGTTCGGCGACGACGGCGCCTTCCGCTACGAGTCGGCGACCCTCTGGGCGGCGCTGCTGCACCTGCACCGGGGCACG CCGTACATCTACCAGGGCGAGGAGATCGGCATGACCAACGTGCCGTTCACCGGGATCGACGACTTCCGCGACATCGAGTC GGTCAACTACTACCGGGAGAACGTCGACGAGCTCGGCCGGCCCGAGGAGGAGGTCCTCGCCGGGCTGCGCGCCATGAGCC GCGACAACGCCCGGACCCCCGTCCAGTGGGACGCCAGCCCGACCGCAGGCTTCACCACGGGCGTGCCCTGGATCCCGGTC AGCCCGCGGTCCGTCGAGGTGAACGTCGAGGCCGACCGGGCCTCGGAGCGCTCGGTCTTCGCCTTCTACCAGCGCCTGAT CGACCTGCGGCACACCGACAGCACGGTCGCGCTCGGGAGCTTCACGATGCTCGAGGCCGAGCACCCGCGGCTGTACGCCT TCACCCGCGAGGGCGAGGGCGACCAGCTGCTCGTGGTGGGGAACGTCTCCGCGGAGCCGCTCGACGTGCCGCTGCTCGAC GGCTGGGCGGACGAGGAGCTGGTGCTGGGGAACGTGCCGGGCGACGCGCGGACGACGACGCTCGCGCCGTGGGAGGTTCG GGTGCACCGGAGGACGACCACCCTGAGGTGA Protein sequence : MTRLTPQAQGPAAGTGTSGPGAAPPAWWTRAVVYQVYPRSFADSDGDGVGDLGGILSRLDHLADLGVDVIWLSPVYPSPQ HDNGYDISDYEGIDPLFGTLEDFDALLAEVHARGMKLVMDLVVNHTSDQHPWFQESRSSLTSPKRDWYWWRDARTVTESA LPVEPAVPVEPAEEPRPVEPNDWRSAFSGPAWTFDEPTGQFYLHLFAPQQPDLNWENPEVRQAVYAMMNRWLDRGVDGFR MDVINLVSKRLEQVDGGAEASGIGFQTGPRLHEFLHEMHEAVFAGRDSDLITVGEMPGITVEEARLVTDPARRELDMVFQ FEHVSLDQGADKFDPRPLDLVALKRSLGRWQEGLADVGWNSLYLDNHDQPRLVSRFGDDGAFRYESATLWAALLHLHRGT PYIYQGEEIGMTNVPFTGIDDFRDIESVNYYRENVDELGRPEEEVLAGLRAMSRDNARTPVQWDASPTAGFTTGVPWIPV SPRSVEVNVEADRASERSVFAFYQRLIDLRHTDSTVALGSFTMLEAEHPRLYAFTREGEGDQLLVVGNVSAEPLDVPLLD GWADEELVLGNVPGDARTTTLAPWEVRVHRRTTTLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-111 | 45 |
