|
Name : Sked_31190 (Sked_31190) Accession : YP_003315850.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Virulence Product : type III secretion system ATPase, FliI/YscN Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : - Position : 3467941 - 3469320 bp Length : 1380 bp Strand : - Note : PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta family, beta-barrel domain; TIGRFAM: ATPase FliI/YscN family DNA sequence : ATGACCGGCGACCTGGCGACCGCTCCGGCGACGACCGCCCCGCACCCGAGCCACGCGGCCGCGTCCGCGTGGTCCGGCCT GCTCGGCGCCGCCCGCCCGGAGCGCGTCGGCCAGGTCAGCGCCGCCGTCGGCCTCTCGCTCGACGTGGTCGGGCTCGACT GCGCGCTCGGCGACGTCCTCGCGCTCGGCGAGACCGGCCGGGGGAGCGACGCCTCGATGCTCGCCGAGGTCGTCGCCGTG ACCGGCTCGACCGCGCGCTGCATGCCCCTCGGCGCGATGCGCGGCATCCGTCCCGGCCTGCAGGCACGGACCACCGGCGG CGCCCTCCAGGTCCCGGTCGGGTCCGGGCTCCTCGGCCGCGTGGTCGACGGCCTCGGCCGCCCCCTCGACGGCAGGGGCC CGCTCGTGGGGACCACCACGGTGCCCCTCGACGGCCGCGCGCCGCACCCGCTCGAGCGCCAGCGCGTCGCGCAGCCGCTC ACGCTCGGCGTGCGCACCCTCGACACCCTCACGACCGTCGGCCGCGGCCAGCGCATGGGCCTGTTCGCCGGCTCGGGCGT CGGCAAGTCGACCCTGCTGTCCATGGTGGCCCGCGGGACCGACGCCGCGGTGAGCGTCATCGCCCTCGTCGGCGAGCGTG GCCGTGAGGTCCGCGAGTTCCTCGAGGACGACCTCGGACCCGAGGGCCTCGCCCGCTCCGTCGTGGTCGTCGCCACCTCC GACGAGCCCGCGCTCGTGCGGCTGCGCGCCGCGTTCGTGGCGACCCGCATCGCCGAGTCCTTCCGCGAGAGCGGCGAGGA CGTCGTGCTCATGATGGACTCGCTTACCCGCGTCGCCATGGCGCAGCGCGAGATCGGCCTGTCCGTCGGCGAGCCCCCCG CGACGCGCGGCTACCCGCCCTCCACCTTCTCGGTGCTCGCCGAGCTCCTCGAGCGCGCCGGCACCTCCGCCCGCGGCTCG GTCACCGGTATCTACACGGTCCTCGTCGACGGCGACGACCACAACGAGCCGATCGCCGACGCCGCGCGCTCGATCCTCGA CGGGCACGTCGTCCTCGACCGTCGTCTCGCCGTCGCCGGGCACTTCCCGAGCATCGACGCCCTCGGCTCGATCTCGCGCG TCGCGACCCGCGTCACGAGCGCCGCGCAGCGCGCCGACGCGACCGCCCTGCGCAAGGTGATGTCCGCGCGACGCGCCGTC CAGGACCTCGTCGACGTCGGAGCATACGTGCAGGGCAGCAACCCGCTGGTCGACGCGGCCCTCGCGCACCAGGGCGCGAT CGACGCGTTCCTGCAGCAGGGCGTCGACGAGCCTGCGCCCTCCGAGCAGTCGTGGGCCGCGCTGCGCGGCCTCGTGCAGG GCATGGGGGTGGCCGCATGA Protein sequence : MTGDLATAPATTAPHPSHAAASAWSGLLGAARPERVGQVSAAVGLSLDVVGLDCALGDVLALGETGRGSDASMLAEVVAV TGSTARCMPLGAMRGIRPGLQARTTGGALQVPVGSGLLGRVVDGLGRPLDGRGPLVGTTTVPLDGRAPHPLERQRVAQPL TLGVRTLDTLTTVGRGQRMGLFAGSGVGKSTLLSMVARGTDAAVSVIALVGERGREVREFLEDDLGPEGLARSVVVVATS DEPALVRLRAAFVATRIAESFRESGEDVVLMMDSLTRVAMAQREIGLSVGEPPATRGYPPSTFSVLAELLERAGTSARGS VTGIYTVLVDGDDHNEPIADAARSILDGHVVLDRRLAVAGHFPSIDALGSISRVATRVTSAAQRADATALRKVMSARRAV QDLVDVGAYVQGSNPLVDAALAHQGAIDAFLQQGVDEPAPSEQSWAALRGLVQGMGVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-78 | 50 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-78 | 50 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-76 | 49 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-76 | 49 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-76 | 49 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 6e-76 | 49 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-76 | 49 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-76 | 49 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-76 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sked_31190 | YP_003315850.1 | type III secretion system ATPase, FliI/YscN | VFG1254 | Protein | 2e-80 | 50 |
