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Name : Sked_31050 (Sked_31050) Accession : YP_003315836.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliQ Function : - COG functional category : N : Cell motility COG ID : COG1987 EC number : - Position : 3456950 - 3457222 bp Length : 273 bp Strand : - Note : PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ DNA sequence : ATGGACACCTCGGCAGTCCTCGACATCGGCGTGCAGGGCCTCATCATCGCGGCCAAGCTGTGCGCACCGGTCCTCATCAC GGCGCTCGTCGTCGGTTTTGCGGTCTCGCTCCTGCAGTCCATCACCCAGATCCAGGAGGTCACCCTCAGCTTCGTGCCCA AGGCCATCGCGGTCTCACTCGCGCTGCTGATCTCCGGGCACTGGATGATCTCCGAGATGATCTCGTTCACCCACGAGCTC TTCGGCCGCATCCCCGGTCTGCTCGGGGGCTGA Protein sequence : MDTSAVLDIGVQGLIIAAKLCAPVLITALVVGFAVSLLQSITQIQEVTLSFVPKAIAVSLALLISGHWMISEMISFTHEL FGRIPGLLGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| escS | AFO66341.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-08 | 43 |
| escS | AFO66401.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-08 | 43 |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 4e-05 | 43 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 4e-05 | 43 |
| escS | YP_003223489.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 1e-08 | 42 |
| escS | YP_003232139.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 1e-08 | 42 |
| escS | AAK26701.1 | EscS | Virulence | LEE | Protein | 9e-09 | 42 |
| escS | AAL57528.1 | EscS | Virulence | LEE | Protein | 9e-09 | 42 |
| escS | CAC81848.1 | EscS protein | Virulence | LEE II | Protein | 9e-09 | 42 |
| escS | CAI43888.1 | EscS protein | Virulence | LEE | Protein | 2e-08 | 42 |
| unnamed | AAL06355.1 | EscS | Virulence | LEE | Protein | 2e-08 | 42 |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 9e-05 | 42 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 2e-07 | 42 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 2e-07 | 42 |
| escS | ACU09472.1 | hypothetical protein | Not tested | LEE | Protein | 2e-08 | 41 |
| escS | YP_003236102.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 3e-08 | 41 |
| escS | AAC38370.1 | EscS | Virulence | LEE | Protein | 2e-08 | 41 |
| escS | NP_290282.1 | hypothetical protein | Virulence | LEE | Protein | 3e-08 | 41 |
| escS | AAC31527.1 | L0048 | Virulence | LEE | Protein | 2e-08 | 41 |
| ECs4582 | NP_312609.1 | EscS | Virulence | LEE | Protein | 3e-08 | 41 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 5e-08 | 41 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 5e-08 | 41 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 5e-08 | 41 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 5e-07 | 41 |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 4e-07 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sked_31050 | YP_003315836.1 | flagellar biosynthetic protein FliQ | VFG2339 | Protein | 3e-12 | 48 |
| Sked_31050 | YP_003315836.1 | flagellar biosynthetic protein FliQ | VFG2495 | Protein | 2e-08 | 44 |
| Sked_31050 | YP_003315836.1 | flagellar biosynthetic protein FliQ | VFG0716 | Protein | 8e-09 | 41 |
| Sked_31050 | YP_003315836.1 | flagellar biosynthetic protein FliQ | VFG0826 | Protein | 8e-09 | 41 |
