Gene Information

Name : Sked_30720 (Sked_30720)
Accession : YP_003315804.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : daunorubicin resistance ABC transporter ATP-binding subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 3421546 - 3422607 bp
Length : 1062 bp
Strand : +
Note : PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit

DNA sequence :
ATGAGCGACTACGCGATCGAGGCGCACGGCCTCGTCAAGCACTTCGGGTCCACCCGAGCGGTCGACGGCATCGACCTCGA
GGTCCCCGCCGGGACCGTCTACGGCGTGCTGGGCCCCAACGGGGCAGGCAAGACCACCGCGGTGCGGATGCTCGCGACCC
TGCTGCGGCCCGACGCCGGCACCGCCCGGATCCTCGGCCACGACATCCTCCGCGAGGCCGACACCGTCCGCAGCCTCGTC
GGCCTCACCGGGCAGTACGCCTCGGTCGACGAGGACCTCACCGGCGCCGAGAACCTCATGGTGCTCGCGCGCCTCTACGG
GTTCTCCCGGCCCGCAGCCCGTCGGCGCGGCGCCGACCTTCTCGAGGCCTTCGACCTCACCGAGGCGGCCGGCAAGCAGG
TCAAGACGTACTCGGGCGGCATGCGGCGGCGCATCGACCTCGCCGCGAGCCTCGTGATGAGCCCCGCGGTGCTGTTCCTC
GACGAGCCCACCACCGGCCTCGACCCGCGCAGCCGCAACGACGTGTGGGACATCGTCCGGGTGCTCGTGGACGACGGCGC
CACGGTGCTGCTCACCACCCAGTACCTCGAGGAGGCAGACCAGCTGGCGAACCGCATCGCCGTCGTCGACCACGGGAAGG
TCATCGCCGAGGGCACCGCCACGGAGCTCAAGAGCTCGGTGGGGTCGGGCTCGGTCCAGCTGCGCCTGGCCGACCCGTCA
CGCCGCGACGAGGCGGCGCGCATCGTCGCCGGCCTGCTCGGCGAGCCCGACGCCGTCTCGCTGTCCCCCGACCCGGCGGC
GCTCTCGGCACGCATCGACAGCAGTGCCGACGGCTCCGCACGCGCCCACCAGATCCTGCCGAGGCTGCACGACGCGGGGA
TCCACGTCCCCGAGTTCTCGCTCGGCCAGCCGAGCCTCGACGAGGTGTTCCTCGCGCTCACGGGTCAGCCGACAGGCACA
GGTCAGCCGACAGACACAGGGAAGCCGACAGACTCGACCCAGGGCACCGAGGCCGGGCCGGGCTCCGCGGCCGGGCAGAC
CACCGAGGAGGCCACCTCATGA

Protein sequence :
MSDYAIEAHGLVKHFGSTRAVDGIDLEVPAGTVYGVLGPNGAGKTTAVRMLATLLRPDAGTARILGHDILREADTVRSLV
GLTGQYASVDEDLTGAENLMVLARLYGFSRPAARRRGADLLEAFDLTEAAGKQVKTYSGGMRRRIDLAASLVMSPAVLFL
DEPTTGLDPRSRNDVWDIVRVLVDDGATVLLTTQYLEEADQLANRIAVVDHGKVIAEGTATELKSSVGSGSVQLRLADPS
RRDEAARIVAGLLGEPDAVSLSPDPAALSARIDSSADGSARAHQILPRLHDAGIHVPEFSLGQPSLDEVFLALTGQPTGT
GQPTDTGKPTDSTQGTEAGPGSAAGQTTEEATS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2054 YP_005163495.1 methionine import ATP-binding protein Not tested Not named Protein 2e-59 49
CDCE8392_1976 YP_005134507.1 methionine import ATP-binding protein Not tested Not named Protein 2e-59 49