Gene Information

Name : Sked_02870 (Sked_02870)
Accession : YP_003313090.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : alpha-glucosidase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1501
EC number : -
Position : 311320 - 313392 bp
Length : 2073 bp
Strand : +
Note : PFAM: Glycosyl hydrolases family 31

DNA sequence :
GTGCCTGACGCGTTCGTCATCGACACCGACCGTCTGATCTGGAGAGGGAGCGGCGAGACCGTCGTGATCGAGCCCTGGGG
GGCCGACTCGGTGCGCGTGCGCGCCGCGCTCGGCGGCCCGGTGGTCGACACCGACTGGGCGTTGTTGCCGCAGGGGGTTG
CGGCTGGGCTGGGTGAGTCGGCGGGGCGTGGGTCGGGGGTGAGTGTCACCGTCGACGGGGACGTCGCGACGCTCGTCCAC
GGCGAGATCCGTGTGGTGGCGACGTCGCGGGAGTACTACGACTGGCAGGCGCAGTACAGCCGGTCGCGGTGCCGGCTCGA
GTTCTTCGATTCACGTGGAACCTTGCTCTTCGCCGAGGAGGAGGACGGCGGGGCCCTCAAGCTGCGGGCCCGCGACTACG
ACGCGCTGCCCGGCGGGACGCACCGCGCGCGAGTGTCGTTCGTCGGTGCGCGCGACGAGAAGCTCTACGGCATGGGGCAG
TACCAGCAGGACCTCCTCGACCTCAAGGGGTCGACGGTCGAGCTCGCGCACCGCAACTCGCAGGTGTCCGTGCCCTTTGT
CATGTCGAGCGCGGGGTACGGGTTCCTCTGGCACAACCCGGCGATCGGGCGCGCGACCTTCGCGACCAACCGCACCGAGT
GGGTGGCCGAGTCGACGACGCAGATCGACTACTGGGTGACCGCCGGCGCCACGCCTGCTGACATCGCGCGGAACTACGCG
AATGCCACCGGGCACGCGCCGATGATGCCCGAGCACGGACTTGGGTTCTGGCAGTGCAAGCTCCGGTACTCCTCGCAGGA
GGAGCTGCTCACGGTGGCGCGCGAGCACCACCGGCGAGGGCTGCCGATGGACGTGATCGTCGCGGACTTCTTCCACTGGC
CCAAGATGGGCGACTTCAGGTTCGAGGACGAGTTCTGGCCGGACCCGGAGGCTATGGTCGCGGAGCTGGCGGGCATGGGC
ATCGAGCTCATGGTGTCGGTGTGGCCGCAGGTGTCCCTCGAGTCGGAGAACTTCGCCGAGCTCGACCGCCTGGGGTACCT
GGTGCGGTCGAACCGGGGTGTGGACATCCAGATGAGCTTCGAAGGACCGAGCCGGTTCCTCGACGTGACCAACCCTGCCG
CGCGCGAGTGGCTGTGGGCGAAGCTGCGCGTCAACTATCCGGGCGTCAAGCTGTTCTGGCTCGACGAGGCCGAGCCGGAG
TACGCCTTCTTCGAGTTCGGCGCCTACTCGTACTACGCCGGCCAGGTGCTCGAGGTGGGGAACGTCTATCCACAGCTGTT
CTCACGGGCTGTGTACGACGGGCAGGTGGCTGACGGGCAGAGCGATCCGGTGAACCTCGTGCGGTGCGCGTGGGCCGGGT
CGCAGCGGTACGGGGCGCTCGTGTGGTCGGGAGACATCCACTCGTCCTTCCCGTCGATGCGGCGGCAGGTGACGGCCGGG
ATCCACATGGGGGTCGCGGGGATCCCGTGGTTCACGACGGACATCGGCGGGTTCGGGGGCGGGCGGGTCGACGACCCCGC
ATTCCACGAGCTGCTGGTGCGGTGGTTCCAGATGGGGACCTTCATGCCGGTGATGCGGCTGCACGGGGACCGCGGGCCGT
CGCACGAGGTGTTGGCTGCTGACGGGAGCCGGCGCTGTAACTCTGGCGCGGACAACGAGCTGTGGTCGTACGGGCACGAG
GTCTACGAGATCCTGTCGCGGTACGTGCATCTGCGCGAAGAGATGCGGGAGTACACGCGGGGATTGATGGAGGCTGCGCA
TGTTGACGGGCAGCCGGTGATGCGGGGGTTGTTCCACGACTTCCCGGAGGATGCTGCGGCGTGGGATGTGGCCGACCAGT
TCTTGTACGGGCCGTCGTTGCTGGTGGCTCCGGTGCTGGAGGCTGGGGCGAGGACGCGGCGGGTGTACCTGCCGGCGGGG
GCGTCGTGGACGTCGCTGGCGACGGGGGAGCGGTATGACGGTGGGGTGTGGGTCGAGGTCGACGCGCCGCTCGACGTCAT
CCCGGTGTTCGCGCGGGACTCGGCGCTCGCGGAGCTGGTCCGGACAATCGGTACCGAAGCTCCAATCCATTGA

Protein sequence :
MPDAFVIDTDRLIWRGSGETVVIEPWGADSVRVRAALGGPVVDTDWALLPQGVAAGLGESAGRGSGVSVTVDGDVATLVH
GEIRVVATSREYYDWQAQYSRSRCRLEFFDSRGTLLFAEEEDGGALKLRARDYDALPGGTHRARVSFVGARDEKLYGMGQ
YQQDLLDLKGSTVELAHRNSQVSVPFVMSSAGYGFLWHNPAIGRATFATNRTEWVAESTTQIDYWVTAGATPADIARNYA
NATGHAPMMPEHGLGFWQCKLRYSSQEELLTVAREHHRRGLPMDVIVADFFHWPKMGDFRFEDEFWPDPEAMVAELAGMG
IELMVSVWPQVSLESENFAELDRLGYLVRSNRGVDIQMSFEGPSRFLDVTNPAAREWLWAKLRVNYPGVKLFWLDEAEPE
YAFFEFGAYSYYAGQVLEVGNVYPQLFSRAVYDGQVADGQSDPVNLVRCAWAGSQRYGALVWSGDIHSSFPSMRRQVTAG
IHMGVAGIPWFTTDIGGFGGGRVDDPAFHELLVRWFQMGTFMPVMRLHGDRGPSHEVLAADGSRRCNSGADNELWSYGHE
VYEILSRYVHLREEMREYTRGLMEAAHVDGQPVMRGLFHDFPEDAAAWDVADQFLYGPSLLVAPVLEAGARTRRVYLPAG
ASWTSLATGERYDGGVWVEVDAPLDVIPVFARDSALAELVRTIGTEAPIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0551 NP_814321.1 glycosyl hydrolase Not tested Not named Protein 2e-138 43
ef0077 AAM75281.1 EF0077 Not tested Not named Protein 1e-138 43