Gene Information

Name : Sked_27060 (Sked_27060)
Accession : YP_003315444.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase, KdpA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : 3.6.3.12
Position : 3018352 - 3020022 bp
Length : 1671 bp
Strand : -
Note : PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA

DNA sequence :
ATGACCATGAGCGAGACCTGGACAGCCGTCGGGCAGATCTCCCTGCTCGTCGCGGCCCTCGCCGCGGTGCACCTGCCGCT
CGGCGCCTACCTGGCCCACGTGTACACCTCGCCGCGCCACCTGCGGGTCGAGCGCCTCGGCTACCGCGTGATGCGCGTCG
ACGCCGACGCCGAGCAGCGCTGGACCTCGTACCTCTTCTCGCTGCTGGGCTTCTCCCTCGTGTCCCTGCTCGCCCTGTAC
GCGATGGGCCGCCTGCAGGAGCACCTGCCGATGAACCTCGGCGTCAGCGCCTTCGACCCGGCGGGCGCGTGGAACACCGC
GGTGTCCTTCGTGGCGAACACCAACTGGCAGTGGTACTCCGGTGAGGCGGCGGCCGGGCACGTCTTCCAGATGGTCGGCC
TCGCCGTGCAGAACTTCGTCTCGGCGGCGGTCGGCATCTCGGTCGCGATCGCCCTGGTCCGCGGCTTCGCGCGGTCGGGG
ACGGACGGGCGGGTCGGCAACTTCTGGTCCGACCTCACCCGCACCTGCGTGCGCGTCCTGCTGCCGATGTCGCTGCTCGC
TGCGGTCGCACTGCTGGCGACCGGCGTGATCCAGAGCTTCGACCCGCACACCGCGGTCCAGACGGTCTCGGGCGGTTCGC
AGCACCTGCTCGGCGGCCCGGTCGCCTCGCAGGAGGCGATCAAGGAGCTCGGCACCAACGGTGGTGGATTCTTCAACGCT
AACTCGGCACACCCGCTCGAGAACCCGAGCCCGGTGAGCAACCTGCTCGAGATCTTCCTGATCCTCGTCATCCCCTTCAC
GCTGCCGCGCGCTTTCGGCCTCATGGTGCGCGACACCCGTCAGGGCTTCGCGATCGTCTCGGTGATGGGCTCGCTGTTCC
TCGCCGGGACGGCGCTGCTCACCTGGGCGGAGATGTCCGGCCCCGGCCTCGCCGCCCAGGCCGCGGGTGGTGCGCTCGAG
GGCAAGGAGCTGCGCTTCGGCACGGCCGGGTCGGCGCTCTTCGCCGCAGCGACCACCGGCACGTCGACCGGCGCGGTCAA
CGCCATGCACGACTCGCTCACCGCGCCGGGCGGTGGGATCGCCACCTTCAACATGCTGCTGGGGGAGATCGCGCCGGGAG
GTGTCGGGTCCGGCCTCTACGGCATGCTCGTCCTCGCGATCGTCGCGGTGTTCATCGCCGGGCTCATGGTCGGGCGCACG
CCCGAGTACCTCGGCAAGAAGATCGGGCGGCAGGAGATCACCCTCGTCGCCCTCTACATCCTCACCGTGCCGCTGCTGGT
GCTCGTCGGCACCGCCCTCGCGATCTCGCTGCCCGCCGGGCAGGCCGGGATCCAGGAGGCCGGTCCGCACGGTCTCTCCG
AGGTGCTCTACGCGATGACGTCGGCGGCGAACAACAACGGCTCGGCCTTCGCCGGTCTCACCACCGCCACGCCCTTCTAC
AACACGCTGCTCGGCGTCCTCATGCTCGTCGGGCGCTTCGTGCCCATCGCCCTCGTGCTGGCGCTCGCGGGCAGGTTCGC
CAGCCAGAAGACCGTCCCCGCGACCGCAGGCACCCTGCCCACGCACCAGCCGCTCTTCGCAGGGCTGCTCGGGTCTGTCG
CGCTGGTCGTCGTCGGTCTCACCTTCATCCCCGTCCTGTCCCTCGGTCCGATCGTGGAGTCGCTCTCATGA

Protein sequence :
MTMSETWTAVGQISLLVAALAAVHLPLGAYLAHVYTSPRHLRVERLGYRVMRVDADAEQRWTSYLFSLLGFSLVSLLALY
AMGRLQEHLPMNLGVSAFDPAGAWNTAVSFVANTNWQWYSGEAAAGHVFQMVGLAVQNFVSAAVGISVAIALVRGFARSG
TDGRVGNFWSDLTRTCVRVLLPMSLLAAVALLATGVIQSFDPHTAVQTVSGGSQHLLGGPVASQEAIKELGTNGGGFFNA
NSAHPLENPSPVSNLLEIFLILVIPFTLPRAFGLMVRDTRQGFAIVSVMGSLFLAGTALLTWAEMSGPGLAAQAAGGALE
GKELRFGTAGSALFAAATTGTSTGAVNAMHDSLTAPGGGIATFNMLLGEIAPGGVGSGLYGMLVLAIVAVFIAGLMVGRT
PEYLGKKIGRQEITLVALYILTVPLLVLVGTALAISLPAGQAGIQEAGPHGLSEVLYAMTSAANNNGSAFAGLTTATPFY
NTLLGVLMLVGRFVPIALVLALAGRFASQKTVPATAGTLPTHQPLFAGLLGSVALVVVGLTFIPVLSLGPIVESLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 9e-53 51
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 7e-53 51
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 2e-36 41
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-36 41
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-36 41
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-36 41
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-36 41
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 6e-37 41