|
Name : Sked_26180 (Sked_26180) Accession : YP_003315356.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Unknown Product : ABC transporter ATPase Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 2911837 - 2913564 bp Length : 1728 bp Strand : - Note : PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK DNA sequence : ATGAGCACCTCTGCACCCGCTCCCGTGGACGCCACCAGCACGGCAGTCCTGTCCTTCACCGACCTCGACGTCAAGTTCGG CACCGAGTTCGGCACCGTGCACGCCGTCAAGGGCATCTCCCTCGCGGTCCAGCCGGGCGAGGTCCTCGCGCTGGTCGGCG AGTCCGGCTCCGGAAAGTCCGTCACGTCGATGACGGCCCTCGGTCTCCTGCCCAAGAACGCCCGGGTCTCCGGCCGGATC ACGGTCGGCGACACGGTCGTGGGCGAGCTCGACGACCGCGGCCTGCGCCGCATGCGCGGCAACGACGTGGCCATGGTCTT CCAGGAGCCCATGACCGCGCTCAACCCCGTGCTCACCATCGGGTCCCAGCTGACCGAGGCGCTCGAGCTGCACGGCATCG CCTTCGGCAAGAAGGCGCTGGCCCGGGCCGTCGAGCTGCTGCGGATGGTCGGCATCCCCGAGCCGGAGCGTCGCGTCAAG CAGTTCCCGCACGAGCTCTCGGGTGGTCAGCGCCAGCGCGTGGTCATCGCCATGGCCATCAGCTGCGACCCCAAGGTGAT CATCGCCGACGAGCCCACCACGGCTCTCGACGTGACCGTCCAGGCCGACATCCTCGACCTGCTGCGCTCCCTCAAGGACA AGCTCAACACCGGGATCCTGCTCATCACGCACAACATGGGGGTCGTGGCCGACATGGCCGACCGTGTGGCCGTGATGCTC AAGGGCTCGATCGTGGAGACAGGGACCGCCGACGCGGTCCTCAACCACCCGCAGCACGAGTACACCAAGAAGCTGCTCGG GTCCGTGCCCCGTCTCGGATCGGGGCCGGGCCAGCTCGGGACCTCGGTCACCGAGGTCGGGGAAGCGCCCGAGGGCGACA AGCCGGCGCTCGAGCTGAAGAACCTGGTCATCGAGTACCAGCGTCTGGGCAAGCCGCCGTTCCGGGCGGTCGACGACGTG ACCTTCACCGTCGGGTCGGGCGAGATCGTCGGTGTCGTGGGGGAGTCGGGCTCGGGCAAGTCGACCATCGCTCGCTGCGC GCTGGGTCTCATCCCGGCGGTCGGCGGCTCGGTGTCGATCTTCGGGACCAGCTTTGCGGAGATGAACCGCAAGCAGTCCA AGGCGCTGCGCAAGCGCATCGGTGTGGTGTTCCAGGACCCCGCGTCGTCGCTCAACCCGCGGTTCCCCATCGGTGACCTC ATCGCCGAGCCCCTCGTGGTGCACAAGATCGGCGACAAGAAGTCCCGGCTGGCCAAGGTCTACGAGCTGCTCGACGCCGT GGAGCTGCCGCGCGACGTCATCAACCGCTACCCGCACGAGCTCTCGGGCGGTCAGCGTCAGCGCGTGAGCATCGCCCGCG CGCTCACGCTCGACCCGGAGCTGCTGGTCGCCGACGAGCCCACCTCGGCGCTCGACGTGTCGGTCCAGGCGAGCGTCCTG GCGATGTTCACCGCGCTGCAGGAGCGCTACCGCTTCGGCTGCGTCTTCGTCTCGCACGACCTCGCGGTCATCGACATGCT CGCGCACCGCGTCGTGGTGCTGCAGAACGGCAAGATCGTCGAGCAGGGCACGCGTGAAGAGGTGCTGCTCAACCCGCGTG AGGAGTACACGAGGCGTCTTCTCGCAGCGGCACCGGTCCCCGAGCCGGGGGAGCAGCGCCGTCGTCGCGAGGCGCGGCAC ACCCTGCTCACCGAGCTGGGCGACGACATCACCGAGCTCCACACCTGA Protein sequence : MSTSAPAPVDATSTAVLSFTDLDVKFGTEFGTVHAVKGISLAVQPGEVLALVGESGSGKSVTSMTALGLLPKNARVSGRI TVGDTVVGELDDRGLRRMRGNDVAMVFQEPMTALNPVLTIGSQLTEALELHGIAFGKKALARAVELLRMVGIPEPERRVK QFPHELSGGQRQRVVIAMAISCDPKVIIADEPTTALDVTVQADILDLLRSLKDKLNTGILLITHNMGVVADMADRVAVML KGSIVETGTADAVLNHPQHEYTKKLLGSVPRLGSGPGQLGTSVTEVGEAPEGDKPALELKNLVIEYQRLGKPPFRAVDDV TFTVGSGEIVGVVGESGSGKSTIARCALGLIPAVGGSVSIFGTSFAEMNRKQSKALRKRIGVVFQDPASSLNPRFPIGDL IAEPLVVHKIGDKKSRLAKVYELLDAVELPRDVINRYPHELSGGQRQRVSIARALTLDPELLVADEPTSALDVSVQASVL AMFTALQERYRFGCVFVSHDLAVIDMLAHRVVVLQNGKIVEQGTREEVLLNPREEYTRRLLAAAPVPEPGEQRRRREARH TLLTELGDDITELHT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-100 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-71 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-71 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 8e-71 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-71 | 42 |
