Gene Information

Name : Sked_26150 (Sked_26150)
Accession : YP_003315353.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : peptide ABC transporter permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 2907657 - 2908652 bp
Length : 996 bp
Strand : -
Note : PFAM: Binding-protein-dependent transport system inner membrane component

DNA sequence :
ATGCCTGATGGCACCACGCCGGCTCAGAGCCGGCCCTCCCAGGGCACCCCGGCGAGCAACCCTCGCCCCGGCCAGACCCA
CTTCGTCGCCGACGTCTCCGAGACCCCGGTGGCCGTCGTCGACAAGGTCGACGAGGACGCACCCGCCTCGAGCCTGTGGC
GCGACGCCTGGCGCGACCTGCGCCACCGCGTGCTGTTCTGGGTGTCCGCAGCGCTCATCCTCGCGGTGCTCCTCGTCGCG
CTGTTCCCCGGGCTGTTCACCTCGGTCGACCCGCGCTTCTGCGAGCTCCGCAACTCCCTCGGCAACCCCCAGGCCGGCCA
CCCCTTCGGTTTCGACCGCCAGGGCTGCGACGTCTACTCGCGCGTCATCTACGGGGCACGTGCCTCGGTGTCGGTCGGTG
TCCTCACGACCATCGGCGTGGTGCTCCTCGGCGGGCTCATGGGTGCGCTGGCGGGCTTCTACGGCCGCTGGTTCGACTCT
GTCCTGTCCCGCGTGACCGACATCTTCTTCGCGATCCCGCTCGTGCTCGCCGCGATCGTCCTCGGCCAGGTCTTCACCGA
GGGCCGCACGGTCCTCAACGTCGTCGCCGTCCTCACGGTCTTCGGGTGGCCCCAGGTCGCCCGCATCACCCGTGGCGCCG
TCATGAGCGTCAAGAACAACGACTATGTCACCGCCTCGAAGGCGCTCGGGGCCTCGCGCCTGAGCATCCTCGGACGTCAC
GTCCTGCCGAACGCCGCCGCGCCCATCATCGTCGTGGCGACGGTCTCCCTCGGGACGTTCATCGTCGCCGAGGCGACCCT
GTCGTTCCTCGGCCTCGGACTGCCGCAGAGTGTGCTGTCGTGGGGGCACGACATCGCGACGGCACAGTCCTCGCTGCGGA
CCAACCCGAGCGTGCTGCTGTACCCGTCGGTCGCGCTCGCCCTCACGGTCCTCAGCTTCATCATGATGGGTGACGCCGTC
CGCGACGCCCTCGACCCGAAGGCGCGGAAGCGATGA

Protein sequence :
MPDGTTPAQSRPSQGTPASNPRPGQTHFVADVSETPVAVVDKVDEDAPASSLWRDAWRDLRHRVLFWVSAALILAVLLVA
LFPGLFTSVDPRFCELRNSLGNPQAGHPFGFDRQGCDVYSRVIYGARASVSVGVLTTIGVVLLGGLMGALAGFYGRWFDS
VLSRVTDIFFAIPLVLAAIVLGQVFTEGRTVLNVVAVLTVFGWPQVARITRGAVMSVKNNDYVTASKALGASRLSILGRH
VLPNAAAPIIVVATVSLGTFIVAEATLSFLGLGLPQSVLSWGHDIATAQSSLRTNPSVLLYPSVALALTVLSFIMMGDAV
RDALDPKARKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 9e-89 67